RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SOX14O95416 240 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 HIST1H2ABP04908 130 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 LYNP07948 512 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 SHC1P29353 583 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 CCKARP32238 428 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 GIPRP48546 466 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
CPSF3-203ENST00000475482 ZNF620Q6ZNG0 422 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 HIST3H2AQ7L7L0 130 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 ZNF786Q8N393 782 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 FANK1Q8TC84 345 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 HDAC2Q92769 488 aaKnown RBP13.89□□□□□ -0.19
CPSF3-203ENST00000475482 HIST1H2ACQ93077 130 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 DDIT4LQ96D03 193 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 GMPPAQ96IJ6 420 aaPredicted RBP13.89□□□□□ -0.19
CPSF3-203ENST00000475482 KLHL15Q96M94 604 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 FOXC2Q99958 501 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 OPN3Q9H1Y3 402 aaPredicted RBP13.89□□□□□ -0.19
CPSF3-203ENST00000475482 SLC25A19Q9HC21 320 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 C20orf141Q9NUB4 165 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 SCOCQ9UIL1 159 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 BAIAP2Q9UQB8 552 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 TMED7Q9Y3B3 224 aa13.89□□□□□ -0.19
CPSF3-203ENST00000475482 ZNF469Q96JG9 3925 aaPredicted RBP13.88□□□□□ -0.19
CPSF3-203ENST00000475482 TRAV36DV7A0A075B6V5 113 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 TNFSF11O14788 317 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 ZNF208O43345 1280 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
CPSF3-203ENST00000475482 OR7A10O76100 309 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 MT-ATP6P00846 226 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 OPN1LWP04000 364 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 HMGN1P05114 100 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 MAKP20794 623 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 UGT2B10P36537 528 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 PRPS1P60891 318 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 CXCR4P61073 352 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 ISL1P61371 349 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 SIRPAP78324 504 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
CPSF3-203ENST00000475482 CDK5Q00535 292 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 MFSD13AQ14CX5 517 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 ZBED5Q49AG3 693 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 SMARCD3Q6STE5 483 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 P3H2Q8IVL5 708 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 C10orf53Q8N6V4 93 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 ZNF610Q8N9Z0 462 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 OR2T33Q8NG76 320 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 OR6K3Q8NGY3 331 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 OR6S1Q8NH40 331 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 LIPHQ8WWY8 451 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 Q96MT0 163 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 GPA33Q99795 319 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 TMEM185BQ9H7F4 350 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 NANSQ9NR45 359 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 GLRX2Q9NS18 164 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 CHRNA9Q9UGM1 479 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 NDRG3Q9UGV2 375 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 MCTS1Q9ULC4 181 aaKnown RBP13.88□□□□□ -0.19
CPSF3-203ENST00000475482 ACANP16112 2415 aa13.88□□□□□ -0.19
CPSF3-203ENST00000475482 M0R3G1 203 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 CDC42EP2O14613 210 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 AHSA1O95433 338 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 TP53P04637 393 aaPredicted RBP13.87□□□□□ -0.19
CPSF3-203ENST00000475482 FUT1P19526 365 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 EPHA2P29317 976 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 SLC6A6P31641 620 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 CLK1P49759 484 aaKnown RBP13.87□□□□□ -0.19
CPSF3-203ENST00000475482 ART1P52961 327 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 CD47Q08722 323 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 GINS1Q14691 196 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 MAD2L1BPQ15013 274 aaPredicted RBP13.87□□□□□ -0.19
CPSF3-203ENST00000475482 KCTD21Q4G0X4 260 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 C6orf141Q5SZD1 244 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 PDSS1Q5T2R2 415 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 C12orf73Q69YU5 71 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 HBMQ6B0K9 141 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 PTCHD4Q6ZW05 846 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 ADGRG3Q86Y34 549 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 OR8J1Q8NGP2 316 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 FBLIM1Q8WUP2 373 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 SLC25A43Q8WUT9 341 aaPredicted RBP13.87□□□□□ -0.19
CPSF3-203ENST00000475482 MBD6Q96DN6 1003 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 PLEKHA8Q96JA3 519 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 TSSK6Q9BXA6 273 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 OR52D1Q9H346 318 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 ZNF696Q9H7X3 374 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 FKRPQ9H9S5 495 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 CLN6Q9NWW5 311 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 SCN3BQ9NY72 215 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 ZNF229Q9UJW7 825 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 PROCRQ9UNN8 238 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 SIGLEC7Q9Y286 467 aa13.87□□□□□ -0.19
CPSF3-203ENST00000475482 IGKV1D-42A0A075B6H8 117 aa13.86□□□□□ -0.19
CPSF3-203ENST00000475482 SNTNA6NMZ2 147 aa13.86□□□□□ -0.19
CPSF3-203ENST00000475482 SIAH2O43255 324 aa13.86□□□□□ -0.19
CPSF3-203ENST00000475482 NDUFB2O95178 105 aa13.86□□□□□ -0.19
CPSF3-203ENST00000475482 SYNGR4O95473 234 aa13.86□□□□□ -0.19
CPSF3-203ENST00000475482 CH25HO95992 272 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms