RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 ABCB9Q9NP78 766 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 FARSAQ9Y285 508 aaKnown RBP16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 A0A1W2PNU3 283 aaPredicted RBP16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 MS4A18H0YCH9 400 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 MT-CO3P00414 261 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 OCM2P0CE71 109 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 OCMP0CE72 109 aaPredicted RBP16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 CDK5R1Q15078 307 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 MS4A18Q3C1V0 323 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 FAM27D1Q5T7N8 215 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 H1FNTQ75WM6 255 aaPredicted RBP16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 CDC6Q99741 560 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 PPIL3Q9H2H8 161 aaKnown RBP16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 WDR76Q9H967 626 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 SERINC1Q9NRX5 453 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 FOXJ2Q9P0K8 574 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 KLHDC2Q9Y2U9 406 aa16.48■□□□□ 0.23
SEC61A2-213ENST00000475268 TRBV2A0A0J9YWF9 115 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 A0A1W2PQ72 361 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 PRR32B1ATL7 298 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 LOC110117498-PIK3R3F6TDL0 507 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 OGG1O15527 345 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 EDNRAP25101 427 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 CENPAP49450 140 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 GDI2P50395 445 aaKnown RBP16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 MAP2K6P52564 334 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 MLF1P58340 268 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 TLE3Q04726 772 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 TRIM16LQ309B1 348 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 DHRS13Q6UX07 377 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 FADS6Q8N9I5 356 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 SCAIQ8N9R8 606 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 FAM83FQ8NEG4 500 aaPredicted RBP16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 OR13C5Q8NGS8 318 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 OR6N2Q8NGY6 317 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 SMIM19Q96E16 107 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 COX4I2Q96KJ9 171 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 FOXN4Q96NZ1 517 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 POTEKPQ9BYX7 375 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 LIPT2A6NK58 231 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 SLC16A7O60669 478 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 AKR7A3O95154 331 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 IGHMP01871 453 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 HLA-DQA2P01906 255 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 RAB40ALP0C0E4 278 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 CCL3P10147 92 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 SHC1P29353 583 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 RPS15P62841 145 aaKnown RBP16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 MYBPHQ13203 477 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 SSPNQ14714 243 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 RPL22L1Q6P5R6 122 aaKnown RBP16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 MS4A15Q8N5U1 240 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 C5orf34Q96MH7 638 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 SPRY4Q9C004 299 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 CHST11Q9NPF2 352 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 LAMP5Q9UJQ1 280 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 B9D1Q9UPM9 204 aa16.47■□□□□ 0.23
SEC61A2-213ENST00000475268 KMT2EQ8IZD2 1858 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 G3V3Y1 287 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 RPS27P42677 84 aaKnown RBP16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 C19orf57Q0VDD7 668 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 ACSM3Q53FZ2 586 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 TMEM164Q5U3C3 297 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 C3orf33Q6P1S2 294 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 DPY19L4Q7Z388 723 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 CDC20BQ86Y33 519 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 PLCZ1Q86YW0 608 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 FRMD6Q96NE9 622 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 INTS14Q96SY0 518 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 TSPAN10Q9H1Z9 355 aaPredicted RBP16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 POLE4Q9NR33 117 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 HPF1Q9NWY4 346 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 VSX1Q9NZR4 365 aaPredicted RBP16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 FKBP7Q9Y680 259 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 ALPK2Q86TB3 2170 aa16.46■□□□□ 0.23
SEC61A2-213ENST00000475268 CCDC187A0A096LP49 1063 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 SLC22A23A1A5C7 686 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 SNX4O95219 450 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 IFNGR1P15260 489 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 MTNR1BP49286 362 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 PSMD7P51665 324 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 Q0VFX4 171 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 ZP4Q12836 540 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 ZNF181Q2M3W8 571 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 ZNF684Q5T5D7 378 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 DDI2Q5TDH0 399 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 OTPQ5XKR4 325 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 LYSMD2Q8IV50 215 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 KLHL15Q96M94 604 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 PDCD1LG2Q9BQ51 273 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 MROQ9BYG7 248 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 MIXL1Q9H2W2 232 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 ALKBH4Q9NXW9 302 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 COMMD3Q9UBI1 195 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 NPIPA5E9PKD4 350 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 SC5DO75845 299 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 OR8G3PP0DMU2 310 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 ICAM2P13598 275 aa16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 POU3F1Q03052 451 aaPredicted RBP16.45■□□□□ 0.22
SEC61A2-213ENST00000475268 DNASE1L3Q13609 305 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms