RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SPACA3Q8IXA5 215 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 ALDH16A1Q8IZ83 802 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 TMEM251Q8N6I4 163 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 C10orf53Q8N6V4 93 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 NANOGP1Q8N7R0 232 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 TMEM178AQ8NBL3 297 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 BBS1Q8NFJ9 593 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 OR52E2Q8NGJ4 325 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 OR5M1Q8NGP8 315 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 ASB10Q8WXI3 467 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 TMIGD2Q96BF3 282 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 SLC25A36Q96CQ1 311 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 NMD3Q96D46 503 aaKnown RBP5.92□□□□□ -1.46
ATG4A-207ENST00000474825 RNFT2Q96EX2 444 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 PLEKHA8Q96JA3 519 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 KLHL15Q96M94 604 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 C5orf34Q96MH7 638 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 OXGR1Q96P68 337 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 SF3B5Q9BWJ5 86 aaKnown RBP5.92□□□□□ -1.46
ATG4A-207ENST00000474825 MRPL13Q9BYD1 178 aaKnown RBP5.92□□□□□ -1.46
ATG4A-207ENST00000474825 HES7Q9BYE0 225 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 TTTY12Q9BZ98 90 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 RACGAP1Q9H0H5 632 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 MARCH7Q9H992 704 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 ISYNA1Q9NPH2 558 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 INPP5EQ9NRR6 644 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 B4GALT7Q9UBV7 327 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 DKKL1Q9UK85 242 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 RASD1Q9Y272 281 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 RAXQ9Y2V3 346 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 NOX1Q9Y5S8 564 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 SNX5Q9Y5X3 404 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 FKBP7Q9Y680 259 aa5.92□□□□□ -1.46
ATG4A-207ENST00000474825 IGLV1-36A0A0B4J1U3 117 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 TRAV17A0A0B4J275 112 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 TEX13CA0A0J9YWL9 993 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 A0A1B0GVC2 190 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 A0A1W2PNR3 127 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 SLC22A23A1A5C7 686 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 PRSS37A4D1T9 235 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 A6NIZ1 184 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 A6NL46 340 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 FAM183AA6NL82 134 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF99A8MXY4 864 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF814B7Z6K7 855 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 H3BML4 177 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 TRAF3IP2O43734 574 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 GLCEO94923 617 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 INMTO95050 263 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 RAB36O95755 333 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 FADS2O95864 444 aaKnown RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ACTL6AO96019 429 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 F10P00742 488 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 PTHP01270 115 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 IGHG3P01860 377 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 F13BP05160 661 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 SBK2P0C263 348 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 LIMS3P0CW19 117 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 LIMS4P0CW20 117 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ADORA3P0DMS8 318 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 TFPIP10646 304 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 HLA-DOBP13765 273 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 CPN1P15169 458 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF708P17019 499 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 SPI1P17947 270 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 GDF1P27539 372 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 GSTT1P30711 240 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 PTGS2P35354 604 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 MAP2K4P45985 399 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 MEOX1P50221 254 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 LHX2P50458 406 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 DAP3P51398 398 aaKnown RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 SLC16A1P53985 500 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 MLLT10P55197 1068 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 GPR85P60893 370 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 RAP1BP61224 184 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 RAP1AP62834 184 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 CSNK2A1P68400 391 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ARG2P78540 354 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 HSF1Q00613 529 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 TLE3Q04726 772 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 LGALS3BPQ08380 585 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 KRR1Q13601 381 aaKnown RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 HIST3H3Q16695 136 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 RPUSD3Q6P087 351 aaKnown RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 CCDC81Q6ZN84 652 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 Q6ZS92 163 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF367Q7RTV3 350 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 OR6V1Q8N148 313 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 FAM109AQ8N4B1 249 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 STX19Q8N4C7 294 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 TMEM99Q8N816 258 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 POMGNT2Q8NAT1 580 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 LSM14AQ8ND56 463 aaKnown RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 SDR9C7Q8NEX9 313 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 OR4K13Q8NH42 304 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 OR52N1Q8NH53 320 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 OR6X1Q8NH79 312 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF420Q8TAQ5 688 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ZPLD1Q8TCW7 415 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms