RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 Q96M85 177 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 FBXO34Q9NWN3 711 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 STEAP1Q9UHE8 339 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 TRAV8-7A0A075B6U6 113 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 TRAV18A0A075B6X5 111 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 A0A1B0GVT2 93 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 GNB5O14775 395 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 SSX5O60225 188 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 ANXA2P07355 339 aaKnown RBP16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 RPS4Y1P22090 263 aaKnown RBP16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 ATP1B3P54709 279 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 HABP2Q14520 560 aaPredicted RBP16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 IRF4Q15306 451 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF619Q8N2I2 560 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 OR2L5Q8NG80 312 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 OR4K14Q8NGD5 310 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 OR4A4PQ8NGN8 299 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 ELP5Q8TE02 316 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 FGF13Q92913 245 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 BCL2L14Q9BZR8 327 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 TINAGL1Q9GZM7 467 aaPredicted RBP16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF350Q9GZX5 532 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 TMEM231Q9H6L2 316 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 NIT2Q9NQR4 276 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 C14orf105Q9NVL8 296 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 ADAM18Q9Y3Q7 739 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 IER3IP1Q9Y5U9 82 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 EML5Q05BV3 1969 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 GXYLT2A0PJZ3 443 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 SULT2B1O00204 365 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 SCAMP1O15126 338 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 OR2T1O43869 369 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 S100A8P05109 93 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 DBIP07108 87 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 MELTFP08582 738 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 CBR1P16152 277 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 PLAURQ03405 335 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 SRSF4Q08170 494 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 DHRS2Q13268 280 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 VWA2Q5GFL6 755 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF227Q86WZ6 799 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 SKA3Q8IX90 412 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 OR2A1Q8NGT9 310 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 MRPL48Q96GC5 212 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 XKR8Q9H6D3 395 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 TRPV4Q9HBA0 871 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 UPB1Q9UBR1 384 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 OR2AT4A6NND4 320 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 CXCL14O95715 111 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 S100A9P06702 114 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 C6P13671 934 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 ABOP16442 354 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 SREBF2Q12772 1141 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 ECH1Q13011 328 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 NR0B2Q15466 257 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 GABRG1Q8N1C3 465 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 GTPBP8Q8N3Z3 284 aaPredicted RBP16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 ZPLD1Q8TCW7 415 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 ARL11Q969Q4 196 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 NMNAT3Q96T66 252 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 SEC11CQ9BY50 192 aa16.97■□□□□ 0.31
ECHDC1-214ENST00000474289 MCIDASD6RGH6 385 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 VEGFDO43915 354 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 PRSS3P35030 304 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 CAPZA1P52907 286 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 PSMD4P55036 377 aaKnown RBP16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 INPP5JQ15735 1006 aaPredicted RBP16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 LPCAT3Q6P1A2 487 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 OR51D1Q8NGF3 324 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 NXPE3Q969Y0 559 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 CNTNAP3BQ96NU0 1288 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 KCNK15Q9H427 330 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 MRPS30Q9NP92 439 aaKnown RBP16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 TREM1Q9NP99 234 aa16.96■□□□□ 0.31
ECHDC1-214ENST00000474289 ICOSLGO75144 302 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 SPI1P17947 270 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 CD34P28906 385 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 CCR2P41597 374 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 NTHL1P78549 312 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 ZNF684Q5T5D7 378 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 LIN54Q6MZP7 749 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 OR5AK2Q8NH90 309 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 LGR4Q9BXB1 951 aa16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 NOP16Q9Y3C1 178 aaKnown RBP16.96■□□□□ 0.3
ECHDC1-214ENST00000474289 SCN2AQ99250 2005 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 RNGTTO60942 597 aaKnown RBP16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 WNT11O96014 354 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 RAB5BP61020 215 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 ATPAF1Q5TC12 328 aaPredicted RBP16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 NRROSQ86YC3 692 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 SLC39A11Q8N1S5 342 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 LRRC25Q8N386 305 aaPredicted RBP16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 DOK4Q8TEW6 326 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 LRFN5Q96NI6 719 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 POTEKPQ9BYX7 375 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 ACKR4Q9NPB9 350 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 UQCC1Q9NVA1 299 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 FLRT3Q9NZU0 649 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 A0A0B4J2E0 115 aa16.95■□□□□ 0.3
ECHDC1-214ENST00000474289 A0A1B0GX12 115 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms