RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TUBAL3A6NHL2 446 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 PPM1BO75688 479 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 SIX6O95475 246 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 APBB3O95704 486 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 F13BP05160 661 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 FCER2P06734 321 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 EN2P19622 333 aaPredicted RBP19.21■□□□□ 0.67
COL18A1-207ENST00000473212 ITPKBP27987 946 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 TPMTP51580 245 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 LIPNQ5VXI9 398 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 ELSPBP1Q96BH3 223 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 ADAD1Q96M93 576 aaKnown RBP19.21■□□□□ 0.67
COL18A1-207ENST00000473212 MRM2Q9UI43 246 aaKnown RBP19.21■□□□□ 0.67
COL18A1-207ENST00000473212 ING1Q9UK53 422 aaPredicted RBP19.21■□□□□ 0.67
COL18A1-207ENST00000473212 CLDN16Q9Y5I7 305 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 KCNMB2Q9Y691 235 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 NPIPB9F8W1W9 429 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 MAS1P04201 325 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 IL5P05113 134 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 VSIG10L2P0DP72 767 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 ZNF141Q15928 474 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 FAM220AQ7Z4H9 259 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 PARGQ86W56 976 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 C16orf52Q8NHV5 167 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 C3orf49Q96BT1 292 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 RBM18Q96H35 190 aaKnown RBP19.21■□□□□ 0.67
COL18A1-207ENST00000473212 UTP23Q9BRU9 249 aaKnown RBP19.21■□□□□ 0.67
COL18A1-207ENST00000473212 C12orf10Q9HB07 376 aa19.21■□□□□ 0.67
COL18A1-207ENST00000473212 TVP23AA6NH52 213 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 POM121CA8CG34 1229 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 SNRPGP15A8MWD9 76 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 SUSD5O60279 629 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 CTNSO60931 367 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 UPK3AO75631 287 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 CTHP32929 405 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 CCR4P51679 360 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 ALKBH1Q13686 389 aaKnown RBP19.2■□□□□ 0.66
COL18A1-207ENST00000473212 KCNAB1Q14722 419 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 CSRP2Q16527 193 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 SLC6A19Q695T7 634 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 CBLN3Q6UW01 205 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 ALKAL2Q6UX46 152 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 OR10AC1Q8NH08 325 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 SDK1Q7Z5N4 2213 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 ARPC5O15511 151 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 HOXD4P09016 255 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-207ENST00000473212 HOXC4P09017 264 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-207ENST00000473212 DLX2Q07687 328 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-207ENST00000473212 CD226Q15762 336 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 C2orf68Q2NKX9 166 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 FBXO46Q6PJ61 603 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-207ENST00000473212 LRRTM1Q86UE6 522 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 JAZF1Q86VZ6 243 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 BCORP1Q8N888 145 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 OR5M1Q8NGP8 315 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 OR8K3Q8NH51 312 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 COQ8AQ8NI60 647 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 ZDHHC1Q8WTX9 485 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 NSMAFQ92636 917 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 GINS4Q9BRT9 223 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 MRI1Q9BV20 369 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 SRA1Q9HD15 236 aaKnown RBP19.2■□□□□ 0.66
COL18A1-207ENST00000473212 OR10H1Q9Y4A9 318 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 LRP4O75096 1905 aa19.2■□□□□ 0.66
COL18A1-207ENST00000473212 TRAV8-7A0A075B6U6 113 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 MFSD2BA6NFX1 497 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 TSPAN4O14817 238 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 GLSO94925 669 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-207ENST00000473212 PROS1P07225 676 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 TACSTD2P09758 323 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 ATF4P18848 351 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-207ENST00000473212 RPS4XP62701 263 aaKnown RBP19.19■□□□□ 0.66
COL18A1-207ENST00000473212 UBE2IP63279 158 aaKnown RBP19.19■□□□□ 0.66
COL18A1-207ENST00000473212 LTBQ06643 244 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 IL10RAQ13651 578 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 HLXQ14774 488 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-207ENST00000473212 PCGF3Q3KNV8 242 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 MAMSTRQ6ZN01 415 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 SLC16A9Q7RTY1 509 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 ARHGEF39Q8N4T4 335 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 C10orf53Q8N6V4 93 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 TMPRSS13Q9BYE2 586 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 PPA2Q9H2U2 334 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 H0YC42 278 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 IFI6P09912 130 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 PRPS1P60891 318 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 UBE2MP61081 183 aaKnown RBP19.19■□□□□ 0.66
COL18A1-207ENST00000473212 SEC61A1P61619 476 aaKnown RBP19.19■□□□□ 0.66
COL18A1-207ENST00000473212 GLB1L2Q8IW92 636 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 ZNF321PQ8N8H1 164 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 TMEM184BQ9Y519 407 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-207ENST00000473212 ETV7Q9Y603 341 aa19.19■□□□□ 0.66
COL18A1-207ENST00000473212 ANXA2P2A6NMY6 339 aa19.18■□□□□ 0.66
COL18A1-207ENST00000473212 EFCAB7A8K855 629 aa19.18■□□□□ 0.66
COL18A1-207ENST00000473212 LDOC1O95751 146 aaPredicted RBP19.18■□□□□ 0.66
COL18A1-207ENST00000473212 ANXA2P07355 339 aaKnown RBP19.18■□□□□ 0.66
COL18A1-207ENST00000473212 ZP3P21754 424 aa19.18■□□□□ 0.66
COL18A1-207ENST00000473212 ADH7P40394 386 aa19.18■□□□□ 0.66
COL18A1-207ENST00000473212 MECP2P51608 486 aaKnown RBP19.18■□□□□ 0.66
COL18A1-207ENST00000473212 RGS7BPQ6MZT1 257 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms