RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
SMURF1-203ENST00000472627 NOP53Q9NZM5 478 aaKnown RBP11.85□□□□□ -0.51
SMURF1-203ENST00000472627 GPR45Q9Y5Y3 372 aa11.85□□□□□ -0.51
SMURF1-203ENST00000472627 IGLV3-9A0A075B6K5 115 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 CDHR4A6H8M9 788 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 FTCDNL1E5RQL4 147 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 HMGN4O00479 90 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 NPHS1O60500 1241 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 NPIPB7O75200 414 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 PTHP01270 115 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 IGHMP01871 453 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 SERPINA5P05154 406 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 GKN3PP0CG01 181 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 RPS4Y1P22090 263 aaKnown RBP11.84□□□□□ -0.51
SMURF1-203ENST00000472627 OMGP23515 440 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 RPS5P46782 204 aaKnown RBP11.84□□□□□ -0.51
SMURF1-203ENST00000472627 ZNF154Q13106 437 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 TSTQ16762 297 aaKnown RBP11.84□□□□□ -0.51
SMURF1-203ENST00000472627 CARD17Q5XLA6 110 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 C20orf196Q8IYI0 205 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 TMEM123Q8N131 208 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 SPICQ8N5J4 248 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 ANKFN1Q8N957 763 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 OR6N1Q8NGY5 312 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 SLC30A2Q9BRI3 323 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 MECRQ9BV79 373 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 ULBP2Q9BZM5 246 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 BCL2L14Q9BZR8 327 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 LRMDAQ9H2I8 198 aa11.84□□□□□ -0.51
SMURF1-203ENST00000472627 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.514e-8■■■■□ 21.8
SMURF1-203ENST00000472627 PDP1Q9P0J1 537 aaPredicted RBP11.84□□□□□ -0.51
SMURF1-203ENST00000472627 LOC102725191A0A1B0GVB3 256 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 PLSCR5A0PG75 271 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 ZNF726A6NNF4 738 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 RIPK2O43353 540 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 FAM157BP0CG42 384 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 NQO1P15559 274 aaKnown RBP11.83□□□□□ -0.52
SMURF1-203ENST00000472627 ZNF250P15622 560 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 RAG2P55895 527 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 RAB39AQ14964 217 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 MFSD13AQ14CX5 517 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 LARS2Q15031 903 aaKnown RBP11.83□□□□□ -0.52
SMURF1-203ENST00000472627 PDCD1Q15116 288 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 CHI3L2Q15782 390 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 SYPL1Q16563 259 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 DPY19L1Q2PZI1 675 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 UGT3A2Q3SY77 523 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 FAM205BPQ63HN1 556 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 OLFML2AQ68BL7 652 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 NET1Q7Z628 596 aaPredicted RBP11.83□□□□□ -0.52
SMURF1-203ENST00000472627 ANKRD46Q86W74 232 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
SMURF1-203ENST00000472627 KLHL36Q8N4N3 616 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 SLC30A7Q8NEW0 376 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 OR1J2Q8NGS2 313 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 ZNF48Q96MX3 618 aaPredicted RBP11.83□□□□□ -0.52
SMURF1-203ENST00000472627 ZNF75AQ96N20 296 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 FOXB1Q99853 325 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 CITED1Q99966 193 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 RLIMQ9NVW2 624 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 CALML5Q9NZT1 146 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 B3GAT1Q9P2W7 334 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 OR5V1Q9UGF6 321 aa11.83□□□□□ -0.52
SMURF1-203ENST00000472627 LEF1Q9UJU2 399 aaPredicted RBP11.83□□□□□ -0.52
SMURF1-203ENST00000472627 A0A1W2PPM1 405 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 M0R082 166 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 FARS2O95363 451 aaKnown RBP11.82□□□□□ -0.52
SMURF1-203ENST00000472627 CLPTM1O96005 669 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 CHRNGP07510 517 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 ARRB2P32121 409 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 ZNF81P51508 661 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 EMX2Q04743 252 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 TBC1D28Q2M2D7 210 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 FAM69AQ5T7M9 428 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 UNQ6126/PRO20091Q6UXV3 157 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 H1FNTQ75WM6 255 aaPredicted RBP11.82□□□□□ -0.52
SMURF1-203ENST00000472627 PIWIL3Q7Z3Z3 882 aaKnown RBP11.82□□□□□ -0.52
SMURF1-203ENST00000472627 DPPA2Q7Z7J5 298 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 RNF130Q86XS8 419 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 KIR3DL3Q8N743 410 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 ICA1LQ8NDH6 482 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 OR52E2Q8NGJ4 325 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 OR52P1PQ8NH57 321 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 ZNF417Q8TAU3 575 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 PNPT1Q8TCS8 783 aaKnown RBP11.82□□□□□ -0.52
SMURF1-203ENST00000472627 MZB1Q8WU39 189 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 SLC38A4Q969I6 547 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 DIRC2Q96SL1 478 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 ZNF587Q96SQ5 575 aaPredicted RBP11.82□□□□□ -0.52
SMURF1-203ENST00000472627 RBM4BQ9BQ04 359 aaKnown RBP11.82□□□□□ -0.52
SMURF1-203ENST00000472627 CYSLTR2Q9NS75 346 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 ASIC5Q9NY37 505 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 RPS6KB2Q9UBS0 482 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 SEC14L4Q9UDX3 406 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 ZNF232Q9UNY5 417 aa11.82□□□□□ -0.52
SMURF1-203ENST00000472627 GPANK1O95872 356 aa11.81□□□□□ -0.52
SMURF1-203ENST00000472627 OR8G3PP0DMU2 310 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms