RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 ULBP3Q9BZM4 244 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 NMNAT2Q9BZQ4 307 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 SEMA4CQ9C0C4 833 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 NDEL1Q9GZM8 345 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 TMEM185BQ9H7F4 350 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 B3GAT2Q9NPZ5 323 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 PPP4R1LQ9P1A2 415 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 ST6GALNAC2Q9UJ37 374 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 LAMP5Q9UJQ1 280 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 TBC1D24Q9ULP9 559 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 RASD1Q9Y272 281 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 SLC6A5Q9Y345 797 aa4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 AK6Q9Y3D8 172 aaKnown RBP4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 PTRH2Q9Y3E5 179 aaKnown RBP4.4□□□□□ -1.71
TM4SF1-202ENST00000472441 A0A0B4J203 849 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 HTR3EA5X5Y0 456 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ACOD1A6NK06 481 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 VSTM2BA6NLU5 285 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 PRR32B1ATL7 298 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 D6RAR5 112 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SLC16A7O60669 478 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 PTTG1O95997 202 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SYPP08247 313 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 CSF3P09919 207 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ELK1P19419 428 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 RAB3BP20337 219 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SOX2P48431 317 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 INPP1P49441 399 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 EVX1P49640 407 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 EIF2B2P49770 351 aaKnown RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 GGTLC2Q14390 218 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 CDK5R1Q15078 307 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 CDONQ4KMG0 1287 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 PRAMEF20Q5VT98 475 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ZNF385CQ66K41 422 aaPredicted RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 RPL22L1Q6P5R6 122 aaKnown RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SLC35D2Q76EJ3 337 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 Q8N402 240 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ZNF433Q8N7K0 673 aaPredicted RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SAMD12Q8N8I0 201 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 TMEM105Q8N8V8 129 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ZNF248Q8NDW4 579 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 C19orf18Q8NEA5 215 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 LIPHQ8WWY8 451 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 OIT3Q8WWZ8 545 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 TMEM234Q8WY98 164 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 HSD17B8Q92506 261 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SMIM19Q96E16 107 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 MRPL48Q96GC5 212 aaKnown RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 PTDSS2Q9BVG9 487 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 TSPAN10Q9H1Z9 355 aaPredicted RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 MMP28Q9H239 520 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ARRDC1-AS1Q9H2J1 176 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 C12orf10Q9HB07 376 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 CPNE5Q9HCH3 593 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 MYOTQ9UBF9 498 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 EXTL2Q9UBQ6 330 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 C19orf25Q9UFG5 118 aaPredicted RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 GTF2A1LQ9UNN4 478 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 TRAPPC4Q9Y296 219 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 MRPS7Q9Y2R9 242 aaKnown RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 KLHDC2Q9Y2U9 406 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 PRR14LQ5THK1 2151 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 LRBAP50851 2863 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ZNF407Q9C0G0 2248 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 RALGAPA1Q6GYQ0 2036 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 B4DXG7 233 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 YKT6O15498 198 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 OGG1O15527 345 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 RAD1O60671 282 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 AKR7A3O95154 331 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SERPINA3P01011 423 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 APEHP13798 732 aaKnown RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 TPTEP56180 551 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 NANOS3P60323 173 aaKnown RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 RPL27P61353 136 aaKnown RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 FOXK1P85037 733 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 CDC20Q12834 499 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 FOXF1Q12946 379 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 TRAM1Q15629 374 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SGCBQ16585 318 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ISXQ2M1V0 245 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 RNASE12Q5GAN4 147 aaKnown RBP4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 LIPNQ5VXI9 398 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 TRIQKQ629K1 86 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 GPR139Q6DWJ6 353 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SFXN4Q6P4A7 337 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 LRRC69Q6ZNQ3 347 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SLC16A9Q7RTY1 509 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 FAM220AQ7Z4H9 259 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 RDH10Q8IZV5 341 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SYS1Q8N2H4 156 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 GALNT6Q8NCL4 622 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 NUBPLQ8TB37 319 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 C5orf34Q96MH7 638 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SLC25A18Q9H1K4 315 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 NOX4Q9NPH5 578 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 SLC39A1Q9NY26 324 aa4.39□□□□□ -1.71
TM4SF1-202ENST00000472441 ADAM30Q9UKF2 790 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms