RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 DEDD2Q8WXF8 326 aa3.67□□□□□ -1.82
SGCE-210ENST00000472326 SPIN2AQ99865 258 aa3.67□□□□□ -1.82
SGCE-210ENST00000472326 SPIN2BQ9BPZ2 258 aa3.67□□□□□ -1.82
SGCE-210ENST00000472326 RMND5AQ9H871 391 aa3.67□□□□□ -1.82
SGCE-210ENST00000472326 NOX3Q9HBY0 568 aa3.67□□□□□ -1.82
SGCE-210ENST00000472326 OR12D3Q9UGF7 316 aa3.67□□□□□ -1.82
SGCE-210ENST00000472326 AP1M2Q9Y6Q5 423 aa3.67□□□□□ -1.82
SGCE-210ENST00000472326 FANCIQ9NVI1 1328 aa3.67□□□□□ -1.82
SGCE-210ENST00000472326 MAPKBP1O60336 1514 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 TOM1O60784 492 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 BGLAPP02818 100 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 NCK1P16333 377 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 CRYBB1P53674 252 aaPredicted RBP3.66□□□□□ -1.82
SGCE-210ENST00000472326 SFT2D3Q587I9 215 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 OR4F3Q6IEY1 312 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 LINC00173Q6ZV60 143 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 OR2T3Q8NH03 318 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 SMARCD2Q92925 531 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 NDFIP1Q9BT67 221 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 TM9SF3Q9HD45 589 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 ZNF222Q9UK12 451 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 MED1Q15648 1581 aaPredicted RBP3.66□□□□□ -1.82
SGCE-210ENST00000472326 MROH2BQ7Z745 1585 aa3.66□□□□□ -1.82
SGCE-210ENST00000472326 TARBP1Q13395 1621 aaKnown RBP3.66□□□□□ -1.82
SGCE-210ENST00000472326 COL1A2P08123 1366 aa3.65□□□□□ -1.82
SGCE-210ENST00000472326 PNPLA6Q8IY17 1366 aa3.65□□□□□ -1.82
SGCE-210ENST00000472326 CIB4A0PJX0 185 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 COLCA2A8K830 154 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 B4GALT5O43286 388 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 PGAM1P18669 254 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 NCBP2P52298 156 aaKnown RBP eCLIP3.65□□□□□ -1.83
SGCE-210ENST00000472326 ERVK-25P63136 954 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 KLHL38Q2WGJ6 581 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 SLC25A24Q6NUK1 477 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 PGAM4Q8N0Y7 254 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 EMG1Q92979 244 aaKnown RBP3.65□□□□□ -1.83
SGCE-210ENST00000472326 ING2Q9H160 280 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 UGT1A7Q9HAW7 530 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 UGT1A10Q9HAW8 530 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 UGT1A8Q9HAW9 530 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 POLE4Q9NR33 117 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 PTBP2Q9UKA9 531 aaKnown RBP3.65□□□□□ -1.83
SGCE-210ENST00000472326 SNX6Q9UNH7 406 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 PTPRMP28827 1452 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 MAGI1Q96QZ7 1491 aaPredicted RBP3.65□□□□□ -1.83
SGCE-210ENST00000472326 IGSF9BQ9UPX0 1349 aa3.65□□□□□ -1.83
SGCE-210ENST00000472326 XKRYO14609 159 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 DUSP3P51452 185 aaPredicted RBP3.64□□□□□ -1.83
SGCE-210ENST00000472326 CDK16Q00536 496 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 STK11Q15831 433 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 UBE2SQ16763 222 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 TTLL9Q3SXZ7 439 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 FILIP1LQ4L180 1135 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 PDZK1Q5T2W1 519 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 NANOGP8Q6NSW7 305 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 C19orf35Q6ZS72 473 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 ZSCAN30Q86W11 494 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 ZNF679Q8IYX0 411 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 LYPD1Q8N2G4 141 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 FAM110BQ8TC76 370 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 MAGEE2Q8TD90 523 aaPredicted RBP3.64□□□□□ -1.83
SGCE-210ENST00000472326 RBM14Q96PK6 669 aaKnown RBP3.64□□□□□ -1.83
SGCE-210ENST00000472326 MTMR9Q96QG7 549 aa3.64□□□□□ -1.83
SGCE-210ENST00000472326 RIOK1Q9BRS2 568 aaKnown RBP3.64□□□□□ -1.83
SGCE-210ENST00000472326 ABCC8Q09428 1581 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 CEP170Q5SW79 1584 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 IGKV1D-17A0A075B6S4 117 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 IGKV1D-13A0A0B4J2D9 117 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 CCDC182A6NF36 153 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 ANGPT2O15123 496 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 ZDHHC11BP0C7U3 371 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 IGKV1-13P0DP09 117 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 OMGP23515 440 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 OPRD1P41143 372 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 GYG1P46976 350 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 KLHL30Q0D2K2 578 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 AQP6Q13520 282 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 NUDCD3Q8IVD9 361 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 OR5W2Q8NH69 310 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 PYROXD1Q8WU10 500 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 GEMIN6Q8WXD5 167 aaKnown RBP3.63□□□□□ -1.83
SGCE-210ENST00000472326 SGK3Q96BR1 496 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 ZNF578Q96N58 590 aaPredicted RBP3.63□□□□□ -1.83
SGCE-210ENST00000472326 GABARAPL3Q9BY60 117 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 ADAP2Q9NPF8 381 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 SIRT7Q9NRC8 400 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 SRCAPQ6ZRS2 3230 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 CARMIL3Q8ND23 1372 aa3.63□□□□□ -1.83
SGCE-210ENST00000472326 KIF26AQ9ULI4 1882 aaPredicted RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 NOL3O60936 208 aaKnown RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 SCGNO76038 276 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 SLC2A5P22732 501 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 NPBWR2P48146 333 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 ATP1B3P54709 279 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 NCBP1Q09161 790 aaKnown RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 VAX1Q5SQQ9 334 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 NCCRP1Q6ZVX7 275 aaPredicted RBP3.62□□□□□ -1.83
SGCE-210ENST00000472326 UTS2BQ765I0 119 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 SYNPRQ8TBG9 265 aa3.62□□□□□ -1.83
SGCE-210ENST00000472326 SDR42E1Q8WUS8 393 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms