RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 PIGFQ07326 219 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 KLF10Q13118 480 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 MELKQ14680 651 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF74Q16587 644 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 MSMPQ1L6U9 139 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 C3orf36Q3SXR2 165 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 SLC46A3Q7Z3Q1 461 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 PATL1Q86TB9 770 aaKnown RBP13.3□□□□□ -0.28
COL1A1-203ENST00000471344 CALHM3Q86XJ0 350 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 ZCCHC24Q8N2G6 241 aaKnown RBP13.3□□□□□ -0.28
COL1A1-203ENST00000471344 VRK1Q99986 396 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-203ENST00000471344 PRSS27Q9BQR3 290 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 ULBP2Q9BZM5 246 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 B3GNT2Q9NY97 397 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 TAS2R5Q9NYW4 299 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 GMPR2Q9P2T1 348 aaKnown RBP13.3□□□□□ -0.28
COL1A1-203ENST00000471344 NOX1Q9Y5S8 564 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 PMF1-BGLAPU3KQ54 211 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 TRAPPC13A5PLN9 417 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 MRASO14807 208 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-203ENST00000471344 MT-ATP6P00846 226 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 IGFBP1P08833 259 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-203ENST00000471344 CD79AP11912 226 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 HOXB1P14653 301 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-203ENST00000471344 PAX7P23759 505 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 DSCR9P59020 149 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 SNRPD2P62316 118 aaKnown RBP13.29□□□□□ -0.28
COL1A1-203ENST00000471344 LOXL1Q08397 574 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-203ENST00000471344 C6orf52Q5T4I8 152 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 KRT80Q6KB66 452 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF813Q6ZN06 617 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 CCDC80Q76M96 950 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 PXKQ7Z7A4 578 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 CARM1Q86X55 608 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 SNX32Q86XE0 403 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 SVOPLQ8N434 492 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 FAM169BQ8N8A8 192 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 OR6N1Q8NGY5 312 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 PFN4Q8NHR9 129 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 FGFBP3Q8TAT2 258 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 SLC26A7Q8TE54 656 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 LRRC58Q96CX6 371 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF75AQ96N20 296 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 TNFRSF13CQ96RJ3 184 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF426Q9BUY5 554 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 PCDHAC1Q9H158 963 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 PLK3Q9H4B4 646 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 MEPEQ9NQ76 525 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-203ENST00000471344 SAR1AQ9NR31 198 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 MRGBPQ9NV56 204 aa13.29□□□□□ -0.28
COL1A1-203ENST00000471344 TMEM129A0AVI4 362 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF726A6NNF4 738 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 hCG_2039718K7EN88 272 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 PATE4P0C8F1 98 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 BMP4P12644 408 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 SLC25A16P16260 332 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF16P17020 682 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-203ENST00000471344 FUT4P22083 530 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 ARR3P36575 388 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 CSNK1A1P48729 337 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 ARFIP2P53365 341 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 SEC24CP53992 1094 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 SNTB2Q13425 540 aaKnown RBP13.28□□□□□ -0.28
COL1A1-203ENST00000471344 EFNB3Q15768 340 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 CARTPTQ16568 116 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 TTC33Q6PID6 262 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-203ENST00000471344 SLC35D2Q76EJ3 337 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 NKAIN4Q8IVV8 208 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 SLC30A8Q8IWU4 369 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 CDK20Q8IZL9 346 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 NUP37Q8NFH4 326 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 OR4F15Q8NGB8 312 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 C10orf82Q8WW14 230 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 LRR1Q96L50 414 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 POFUT2Q9Y2G5 429 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 SH3GLB1Q9Y371 365 aa13.28□□□□□ -0.28
COL1A1-203ENST00000471344 COL6A5A8TX70 2615 aa13.27□□□□□ -0.28
COL1A1-203ENST00000471344 RTTNQ86VV8 2226 aa13.27□□□□□ -0.28
COL1A1-203ENST00000471344 LOC100653049A0A140TA62 436 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 A8MV72 311 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-203ENST00000471344 VWC2LB2RUY7 222 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 B9A039 149 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 RNF13O43567 381 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 TLX2O43763 284 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-203ENST00000471344 KRT34O76011 436 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 PDE5AO76074 875 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 IGHV4-31P0DP07 118 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 TROVE2P10155 538 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL1A1-203ENST00000471344 ZNF14P17017 642 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-203ENST00000471344 OR1E2P47887 323 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 PTDSS1P48651 473 aaKnown RBP13.27□□□□□ -0.29
COL1A1-203ENST00000471344 UGT2B15P54855 530 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 VLDLRP98155 873 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 RUNX1T1Q06455 604 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 CYLC2Q14093 348 aaPredicted RBP13.27□□□□□ -0.29
COL1A1-203ENST00000471344 GGTLC2Q14390 218 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 GSG1Q2KHT4 349 aa13.27□□□□□ -0.29
COL1A1-203ENST00000471344 INTS11Q5TA45 600 aaKnown RBP13.27□□□□□ -0.29
COL1A1-203ENST00000471344 DEF8Q6ZN54 512 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms