RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ADGRF1Q5T601 910 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FAM199XQ6PEV8 388 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 LCTLQ6UWM7 567 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FAM83HQ6ZRV2 1179 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 LRRC18Q8N456 261 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 LINC00471Q8N535 108 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 EID2Q8N6I1 236 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CYB561A3Q8NBI2 242 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR5K2Q8NHB8 316 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NUDCD2Q8WVJ2 157 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SLC22A18Q96BI1 424 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ZBTB8AQ96BR9 441 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FOXRED1Q96CU9 486 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 PIK3IP1Q96FE7 263 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TEAD3Q99594 435 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ADAM2Q99965 735 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CXorf36Q9H7Y0 433 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PLEKHA1Q9HB21 404 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NOX4Q9NPH5 578 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 MRPL17Q9NRX2 175 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 GDE1Q9NZC3 331 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CXXC1Q9P0U4 656 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 LPAR3Q9UBY5 353 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 MRPS23Q9Y3D9 190 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 TSC2P49815 1807 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PLXNA1Q9UIW2 1896 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SSC5DA1L4H1 1573 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TRAV18A0A075B6X5 111 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR5H15A6NDH6 313 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR5H1A6NKK0 313 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 IFITM10A6NMD0 228 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 IFITM5A6NNB3 132 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 M0QYG6 137 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 LDLRAD4O15165 306 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FGF16O43320 207 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 UGDHO60701 494 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 LRP3O75074 770 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PMS2P2O95744 297 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 IGLV3-25P01717 112 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PCCBP05166 539 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ITGA5P08648 1049 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NPSP0C0P6 89 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 AKAIN1P0CW23 69 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TLX1P31314 330 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 DHPSP49366 369 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 MECP2P51608 486 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 OAZ1P54368 228 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 RAP1AP62834 184 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 HTRA3P83110 453 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 EFNB1P98172 346 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ZNF616Q08AN1 781 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NFATC2Q13469 925 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ZXDCQ2QGD7 858 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 RNASE10Q5GAN6 216 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 C10orf120Q5SQS8 335 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 THEM4Q5T1C6 240 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 HIST2H3PS2Q5TEC6 136 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NKAIN2Q5VXU1 208 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 MEPCEQ7L2J0 689 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 COMMD6Q7Z4G1 85 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TMPRSS12Q86WS5 348 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 THNSL2Q86YJ6 484 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 GID4Q8IVV7 300 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NRMQ8IXM6 262 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SLC35F3Q8IY50 421 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NXPE1Q8N323 547 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PRSS35Q8N3Z0 413 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ZNF610Q8N9Z0 462 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR52L1Q8NGH7 329 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR51L1Q8NGJ5 315 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR5M8Q8NGP6 311 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR6N1Q8NGY5 312 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 OR6X1Q8NH79 312 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 ZCCHC10Q8TBK6 192 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CLP1Q92989 425 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 ZNF649Q9BS31 505 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 RIOK2Q9BVS4 552 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 DDA1Q9BW61 102 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SEMA6CQ9H3T2 930 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FKRPQ9H9S5 495 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TXNRD2Q9NNW7 524 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 NRIP3Q9NQ35 241 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 C19orf12Q9NSK7 152 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SEMA4GQ9NTN9 838 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 IL17CQ9P0M4 197 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 CACFD1Q9UGQ2 172 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 MBD1Q9UIS9 605 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 GNG8Q9UK08 70 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 FOXJ3Q9UPW0 622 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 SH2B3Q9UQQ2 575 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 EXOGQ9Y2C4 368 aaKnown RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 TMEM184BQ9Y519 407 aaPredicted RBP3.87□□□□□ -1.79
VPS50-210ENST00000471188 CSAG2Q9Y5P2 127 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 PDE4DIPQ5VU43 2346 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 TRPM7Q96QT4 1865 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 LOC285556D6RIA3 1793 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 IDSB3KWA1 339 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 UMAD1C9J7I0 102 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 BLOC1S5-TXNDC5H3BN57 136 aa3.87□□□□□ -1.79
VPS50-210ENST00000471188 MFNGO00587 321 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms