RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CDH10Q9Y6N8 788 aa15.77■□□□□ 0.11
MRPL28-208ENST00000469744 OR2M5A3KFT3 312 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 NPIPB9F8W1W9 429 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 H3BML4 177 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 PRODHO43272 600 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 SEC14L5O43304 696 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 AIREO43918 545 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 TGM6O95932 706 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 HTR2AP28223 471 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 RGS6P49758 472 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 LSM11P83369 360 aaKnown RBP eCLIP15.76■□□□□ 0.11
MRPL28-208ENST00000469744 PRKCDQ05655 676 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 C17orf67Q0P5P2 114 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 RPL13AP3Q6NVV1 102 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 ZNF620Q6ZNG0 422 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 NRMQ8IXM6 262 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 SLC43A2Q8N370 569 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 IQCF1Q8N6M8 205 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 PROKR2Q8NFJ6 384 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 OR8D4Q8NGM9 314 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 SMPDL3BQ92485 455 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 RNASE6Q93091 150 aaKnown RBP15.76■□□□□ 0.11
MRPL28-208ENST00000469744 ZNF582Q96NG8 517 aaPredicted RBP15.76■□□□□ 0.11
MRPL28-208ENST00000469744 KLHDC3Q9BQ90 382 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 MND1Q9BWT6 205 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 PLA2G12AQ9BZM1 189 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 TRIM2Q9C040 744 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 EGLN3Q9H6Z9 239 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 CRIM1Q9NZV1 1036 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 VDAC3Q9Y277 283 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 ERGIC3Q9Y282 383 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 A3GALT2U3KPV4 340 aa15.76■□□□□ 0.11
MRPL28-208ENST00000469744 NPIPA5A0A0B4J1W7 369 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 ALG1L2C9J202 215 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 NPIPA7E9PJI5 369 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 NDUFB5O43674 189 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 NPIPA8P0DM63 369 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 NR4A1P22736 598 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 RBM34P42696 430 aaKnown RBP15.75■□□□□ 0.11
MRPL28-208ENST00000469744 KIR2DL3P43628 341 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 CLK1P49759 484 aaKnown RBP15.75■□□□□ 0.11
MRPL28-208ENST00000469744 SUCLG1P53597 346 aaKnown RBP15.75■□□□□ 0.11
MRPL28-208ENST00000469744 CTBP2P56545 445 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 CLDN15P56746 228 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 CLDN20P56880 219 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 HOXC5Q00444 222 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 FGFBP1Q14512 234 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.75■□□□□ 0.11
MRPL28-208ENST00000469744 TMPRSS11FQ6ZWK6 438 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 USP43Q70EL4 1123 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 ZNF550Q7Z398 422 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 CDH24Q86UP0 819 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 NANOGP1Q8N7R0 232 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 TMEM255BQ8WV15 326 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 TMEM239Q8WW34 195 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 S100ZQ8WXG8 99 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 WNT2BQ93097 391 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 SH3YL1Q96HL8 342 aaPredicted RBP15.75■□□□□ 0.11
MRPL28-208ENST00000469744 MGLLQ99685 303 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 NPAS1Q99742 590 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 TM9SF2Q99805 663 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 TBC1D23Q9NUY8 699 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 OSGIN1Q9UJX0 560 aa15.75■□□□□ 0.11
MRPL28-208ENST00000469744 LSM2Q9Y333 95 aaKnown RBP15.75■□□□□ 0.11
MRPL28-208ENST00000469744 IGLV3-32A0A0A0MS00 114 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 RCBTB2O95199 551 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 RAB36O95755 333 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 PEPDP12955 493 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 PRG2P13727 222 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 TBXA2RP21731 343 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 OPRM1P35372 400 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 ATP12AP54707 1039 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 VBP1P61758 197 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 RAB40BQ12829 278 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 PGGHGQ32M88 737 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 FBXL19-AS1Q494R0 122 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 GDPGP1Q6ZNW5 385 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 CHMP1BQ7LBR1 199 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 LUZP2Q86TE4 346 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 LSMEM1Q8N8F7 131 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 KBTBD8Q8NFY9 601 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 NDNFQ8TB73 568 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 NRGNQ92686 78 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 RFKQ969G6 155 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 ZHX1-C8orf76Q96EF9 292 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 LRR1Q96L50 414 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 TAPBPLQ9BX59 468 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 ISYNA1Q9NPH2 558 aa15.74■□□□□ 0.11
MRPL28-208ENST00000469744 UNC119BA6NIH7 251 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 CCRL2O00421 344 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 HCRTR2O43614 444 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 CHP2O43745 196 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 IL18BPO95998 194 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 SCG5P05408 212 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 NGFRP08138 427 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 HPGDP15428 266 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 GADD45AP24522 165 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 GRK5P34947 590 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 BMXP51813 675 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 NCS1P62166 190 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms