RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 GSTA2P09210 222 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CCL2P13500 99 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF12P17014 697 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF14P17017 642 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 IMPDH1P20839 514 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 TACR3P29371 465 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CD80P33681 288 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 GLRXP35754 106 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CRYBB2P43320 205 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CAPZA2P47755 286 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CCT3P49368 545 aaKnown RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 EVX1P49640 407 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 PLTPP55058 493 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CLDN17P56750 224 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 PROK1P58294 105 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 FUT5Q11128 374 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF154Q13106 437 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 TAF9Q16594 264 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CEACAM16Q2WEN9 425 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 C3orf36Q3SXR2 165 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 GLIPR1L2Q4G1C9 344 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 RFTN2Q52LD8 501 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 ARMCX4Q5H9R4 360 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 KPRPQ5T749 579 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CLEC6AQ6EIG7 209 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 TYW3Q6IPR3 259 aaKnown RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 BRD3OSQ6XYD6 125 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 GRINAQ7Z429 371 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 GSPT2Q8IYD1 628 aaKnown RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 GLB1L3Q8NCI6 653 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 LINC01006Q8NI28 216 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 TMEM234Q8WY98 164 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 POP5Q969H6 163 aaKnown RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 RAB39BQ96DA2 213 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 GPA33Q99795 319 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 MRPL57Q9BQC6 102 aaKnown RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 NAA11Q9BSU3 229 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 CHIAQ9BZP6 476 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 MS4A7Q9GZW8 240 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 MRPL46Q9H2W6 279 aaKnown RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 TUBB1Q9H4B7 451 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 BEX1Q9HBH7 125 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 GPR35Q9HC97 309 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 HHATLQ9HCP6 504 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 MID1IP1Q9NPA3 183 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 ADPRHL2Q9NX46 363 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 PURGQ9UJV8 347 aaKnown RBP4.44□□□□□ -1.7
PTPN4-209ENST00000469511 RCE1Q9Y256 329 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 INSIG2Q9Y5U4 225 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 GPR45Q9Y5Y3 372 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 AUP1Q9Y679 476 aa4.44□□□□□ -1.7
PTPN4-209ENST00000469511 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 IGHV1-69-2A0A0G2JMI3 117 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 A0A1W2PPW3 197 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 C17orf100A8MU93 164 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 VSTM5A8MXK1 200 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 TIMM23O14925 209 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 HSPA4LO95757 839 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 SCGB1D2O95969 90 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ENO1P06733 434 aaKnown RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 LPLP06858 475 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 THRBP10828 461 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 CD79AP11912 226 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 STX2P32856 288 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ARR3P36575 388 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 RAD52P43351 418 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 GSTM5P46439 218 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ATP4BP51164 291 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 LOXL3P58215 753 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 MRPS11P82912 194 aaKnown RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 CD83Q01151 205 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 GLO1Q04760 184 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 C2orf54Q08AI8 447 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 TRIM25Q14258 630 aaKnown RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 HLXQ14774 488 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 RAB39AQ14964 217 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ODF1Q14990 250 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 IMPG1Q17R60 797 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 TOR2AQ5JU69 321 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 LIPMQ5VYY2 423 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 SAXO2Q658L1 398 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 RUSC1-AS1Q66K80 236 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 TMEM200BQ69YZ2 307 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 NXNQ6DKJ4 435 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 TMEM225Q6GV28 225 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 FRRS1Q6ZNA5 592 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 CCDC91Q7Z6B0 441 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF584Q8IVC4 421 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 LRRC8AQ8IWT6 810 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 TEX29Q8N6K0 151 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 OR5AN1Q8NGI8 311 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ZFP28Q8NHY6 868 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 CCL17Q92583 94 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 FCRL1Q96LA6 429 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 DCLRE1CQ96SD1 692 aaKnown RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 GAL3ST1Q99999 423 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ERP44Q9BS26 406 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 SF3B5Q9BWJ5 86 aaKnown RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF416Q9BWM5 594 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 RSPO3Q9BXY4 272 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms