RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 EPHA6Q9UF33 1036 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 A4GNTQ9UNA3 340 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.31□□□□□ -0.6
USP11-206ENST00000469080 WDFY3Q8IZQ1 3526 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 DUXAA6NLW8 204 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 APBB3O95704 486 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 TFP02787 698 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 H2AFB1P0C5Y9 115 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 H2AFB2P0C5Z0 115 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 FAM157BP0CG42 384 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 TCEAL6Q6IPX3 200 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 MFSD12Q6NUT3 480 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 RANBP3LQ86VV4 465 aaPredicted RBP11.31□□□□□ -0.6
USP11-206ENST00000469080 NKX3-1Q99801 234 aaPredicted RBP11.31□□□□□ -0.6
USP11-206ENST00000469080 DPAGT1Q9H3H5 408 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 ZFP57Q9NU63 452 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 C20orf141Q9NUB4 165 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 LRIT1Q9P2V4 623 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 MMP17Q9ULZ9 603 aa11.31□□□□□ -0.6
USP11-206ENST00000469080 RPL36Q9Y3U8 105 aaKnown RBP11.31□□□□□ -0.6
USP11-206ENST00000469080 FXYD6-FXYD2A0A087WZ82 144 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 NPIPB8E9PQR5 432 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 NPR2P20594 1047 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ZP2Q05996 745 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 AARDQ4LEZ3 155 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 MANEAQ5SRI9 462 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 SLC43A2Q8N370 569 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 KDM8Q8N371 416 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ARRDC1Q8N5I2 433 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ZNF511Q8NB15 262 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 AP3S1Q92572 193 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 OR2M2Q96R28 347 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 OR2A5Q96R48 311 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 MENTQ9BUN1 341 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ENKD1Q9H0I2 346 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 FXYD6Q9H0Q3 95 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ACSS1Q9NUB1 689 aaPredicted RBP11.3□□□□□ -0.6
USP11-206ENST00000469080 GFOD1Q9NXC2 390 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 PHYHO14832 338 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 RBBP9O75884 186 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 RAB3DO95716 219 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 CSTAP01040 98 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ADRA2AP08913 450 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 IL9P15248 144 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 CD38P28907 300 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 MTNR1AP48039 350 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 BLOC1S1P78537 153 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ALG10BQ5I7T1 473 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 LIPNQ5VXI9 398 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 PLAG1Q6DJT9 500 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 FCRL6Q6DN72 434 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ARHGAP11AQ6P4F7 1023 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 LYPD4Q6UWN0 246 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 LINC00471Q8N535 108 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 PXT1Q8NFP0 134 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 TSLPQ969D9 159 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 SLC25A46Q96AG3 418 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 CD180Q99467 661 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ATG101Q9BSB4 218 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 FAM212BQ9NTI7 297 aaPredicted RBP11.3□□□□□ -0.6
USP11-206ENST00000469080 MRPS33Q9Y291 106 aaKnown RBP11.3□□□□□ -0.6
USP11-206ENST00000469080 COL4A3Q01955 1670 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 DMDP11532 3685 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 MEIKINA0A087WXM9 373 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 DAPL1A0PJW8 107 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ADAP00813 363 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ACP2P11117 423 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 NFYAP23511 347 aaPredicted RBP11.3□□□□□ -0.6
USP11-206ENST00000469080 GIFP27352 417 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 SRP9P49458 86 aaKnown RBP11.3□□□□□ -0.6
USP11-206ENST00000469080 RBP2P50120 134 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 GABREP78334 506 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 FUT5Q11128 374 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 IDNKQ5T6J7 187 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 FAM27D1Q5T7N8 215 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
USP11-206ENST00000469080 GDF7Q7Z4P5 450 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 FAM181AQ8N9Y4 354 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 OR4C6Q8NH72 309 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 HGDQ93099 445 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 MS4A4EQ96PG1 132 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 NEU1Q99519 415 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 GGACTQ9BVM4 153 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 CHST8Q9H2A9 424 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 TMEM185BQ9H7F4 350 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 HHATLQ9HCP6 504 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 OBP2AQ9NY56 170 aa11.3□□□□□ -0.6
USP11-206ENST00000469080 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
USP11-206ENST00000469080 A0A0J9YY10 115 aa11.29□□□□□ -0.6
USP11-206ENST00000469080 SEC14L5O43304 696 aa11.29□□□□□ -0.6
USP11-206ENST00000469080 EEF1E1O43324 174 aaKnown RBP11.29□□□□□ -0.6
USP11-206ENST00000469080 F13BP05160 661 aa11.29□□□□□ -0.6
USP11-206ENST00000469080 HOXB9P17482 250 aaPredicted RBP11.29□□□□□ -0.6
USP11-206ENST00000469080 CSF2RBP32927 897 aa11.29□□□□□ -0.6
USP11-206ENST00000469080 RABIFP47224 123 aa11.29□□□□□ -0.6
USP11-206ENST00000469080 BLKP51451 505 aa11.29□□□□□ -0.6
USP11-206ENST00000469080 PCBP3P57721 371 aaKnown RBP11.29□□□□□ -0.6
USP11-206ENST00000469080 SQSTM1Q13501 440 aa11.29□□□□□ -0.6
USP11-206ENST00000469080 KIR2DS3Q14952 304 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms