RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PRSS35Q8N3Z0 413 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CISD2Q8N5K1 135 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 RNF152Q8N8N0 203 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF610Q8N9Z0 462 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 MDGA1Q8NFP4 955 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR2L3Q8NG85 312 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR52N4Q8NGI2 321 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR5M8Q8NGP6 311 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR5M1Q8NGP8 315 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR13C8Q8NGS7 320 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR14K1Q8NGZ2 314 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR4C6Q8NH72 309 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 HUS1BQ8NHY5 278 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 FAM151AQ8WW52 585 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PIGKQ92643 395 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 FOXRED1Q96CU9 486 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF668Q96K58 619 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZBTB45Q96K62 511 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 FAM71F1Q96KD3 344 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SAMD8Q96LT4 415 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CCDC140Q96MF4 163 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR14A2Q96R54 314 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF607Q96SK3 696 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PKP4Q99569 1192 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ZFYVE21Q9BQ24 234 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SULT4A1Q9BR01 284 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PIGQQ9BRB3 760 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PDCD2LQ9BRP1 358 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 NDC1Q9BTX1 674 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SLC17A9Q9BYT1 436 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 POTEKPQ9BYX7 375 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR2AG1Q9H205 316 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 OR10A4Q9H209 315 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ABHD16BQ9H3Z7 469 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 CDCP1Q9H5V8 836 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 FKRPQ9H9S5 495 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TBC1D17Q9HA65 648 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 BRF2Q9HAW0 419 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 RHOFQ9HBH0 211 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 RPS10P5Q9NQ39 176 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ADARB2Q9NS39 739 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM161AQ9NX61 479 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 TAS2R16Q9NYV7 291 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 DNAJC27Q9NZQ0 273 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 DHCR7Q9UBM7 475 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 SLC2A6Q9UGQ3 507 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 APOBEC3BQ9UH17 382 aaKnown RBP4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PITPNC1Q9UKF7 332 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 ADAM18Q9Y3Q7 739 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 NME7Q9Y5B8 376 aa4.45□□□□□ -1.7
SF3B1-207ENST00000468925 PARP14Q460N5 1801 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 COL5A2P05997 1499 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 COL11A2P13942 1736 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 BRCA1P38398 1863 aaKnown RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 TRBV6-7A0A0A0MS04 114 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 IGKV6D-21A0A0A0MT36 114 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 C1orf226A1L170 272 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF724A8MTY0 619 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 NCF1CA8MVU1 366 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF705EA8MWA4 302 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 IDSB3KWA1 339 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GPR89AB7ZAQ6 455 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 E7EQ34 232 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GOSR2O14653 212 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 PRRG1O14668 218 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 PCDH7O60245 1069 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GPRIN2O60269 458 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 OR10H3O60404 316 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 OR1I1O60431 355 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 SLC25A12O75746 678 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 AHSA1O95433 338 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 LY86O95711 162 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 FGF19O95750 216 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 LRG1P02750 347 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 WNT1P04628 370 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 RLN1P04808 185 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 RPLP2P05387 115 aaKnown RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CD3GP09693 182 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 SFTA3P0C7M3 94 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GPR89BP0CG08 455 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 COX7A2P14406 83 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 FOLR1P15328 257 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF25P17030 456 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 DRD5P21918 477 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ACKR3P25106 362 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 KLRK1P26718 216 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 AKT2P31751 481 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CCKARP32238 428 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CCR1P32246 355 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 DLSTP36957 453 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 TNFSF9P41273 254 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CX3CR1P49238 355 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 RABGGTBP53611 331 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 OAZ1P54368 228 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GAS1P54826 345 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CARD18P57730 90 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ERVFC1-1P60608 527 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ACTBP60709 375 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 UBE2MP61081 183 aaKnown RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ACTG1P63261 375 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms