RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CCNHP51946 323 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 FBXW4P57775 412 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 GPX6P59796 221 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 SELENBP1Q13228 472 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 CHRNA6Q15825 494 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 NRF1Q16656 503 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 TMEM220Q6QAJ8 160 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 SLC25A48Q6ZT89 311 aaKnown RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 BZW1Q7L1Q6 419 aaKnown RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 CCDC71LQ8N9Z2 235 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 OR7G2Q8NG99 324 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF502Q8TBZ5 544 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 ACER1Q8TDN7 264 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 NRGNQ92686 78 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 RDH5Q92781 318 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 STMN2Q93045 179 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 SLC38A4Q969I6 547 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 SGK3Q96BR1 496 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 RASL11BQ9BPW5 248 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 YTHDF1Q9BYJ9 559 aaKnown RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 ROGDIQ9GZN7 287 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 MFFQ9GZY8 342 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 NEUROG2Q9H2A3 272 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 CLMPQ9H6B4 373 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 EXO5Q9H790 373 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 PLGRKTQ9HBL7 147 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 CRLF2Q9HC73 371 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 RPRD1BQ9NQG5 326 aaKnown RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 RAI1Q7Z5J4 1906 aaPredicted RBP2.93□□□□□ -1.94
VPS13A-209ENST00000467124 IGKV1D-13A0A0B4J2D9 117 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 CCDC182A6NF36 153 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 A8MUA0 341 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 HDAC3O15379 428 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 MOSP00540 346 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 IGKV3-15P01624 115 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 KRT14P02533 472 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 C2P06681 752 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 CHTF8P0CG12 524 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 IGKV1-13P0DP09 117 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF19P17023 458 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 CNR1P21554 472 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 DLX1P56177 255 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 TIMM10P62072 90 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 ERVK-25P63136 954 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 ECH1Q13011 328 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 UNC119Q13432 240 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 KIAA0087Q14695 138 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 CYTH1Q15438 398 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 CTRB2Q6GPI1 263 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 ANKRD26P1Q6NSI1 321 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 TMEM53Q6P2H8 277 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 IL34Q6ZMJ4 242 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 CCDC73Q6ZRK6 1079 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 RNF165Q6ZSG1 346 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF584Q8IVC4 421 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 KATNAL2Q8IYT4 538 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 NKAPP1Q8N9T2 125 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 C20orf203Q8NBC4 194 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 OR4A4PQ8NGN8 299 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 SDR42E1Q8WUS8 393 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 NDRG1Q92597 394 aaKnown RBP2.93□□□□□ -1.94
VPS13A-209ENST00000467124 PEX13Q92968 403 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 FAM122AQ96E09 287 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 FCRL1Q96LA6 429 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF578Q96N58 590 aaPredicted RBP2.93□□□□□ -1.94
VPS13A-209ENST00000467124 ILKAPQ9H0C8 392 aaPredicted RBP2.93□□□□□ -1.94
VPS13A-209ENST00000467124 SRMSQ9H3Y6 488 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 SLC25A22Q9H936 323 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 MRPL47Q9HD33 250 aaKnown RBP2.93□□□□□ -1.94
VPS13A-209ENST00000467124 RETNQ9HD89 108 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 CCNB1IP1Q9NPC3 277 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 SLCO1B3Q9NPD5 702 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 AHSPQ9NZD4 102 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 CLCF1Q9UBD9 225 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 SLC25A15Q9Y619 301 aa2.93□□□□□ -1.94
VPS13A-209ENST00000467124 PSMB11A5LHX3 300 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ERI2A8K979 691 aaKnown RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ERVV-1B6SEH8 477 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 CASQ2O14958 399 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 AKR7A2O43488 359 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 SOX15O60248 233 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 CTAG2O75638 210 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 LY6G6DO95868 133 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 FGF1P05230 155 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ERCC1P07992 297 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 GZMAP12544 262 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 FOLR1P15328 257 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 TUBG1P23258 451 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 GABRR1P24046 479 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 NAA10P41227 235 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 SLC1A2P43004 574 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 YAP1P46937 504 aaKnown RBP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 UQCRFS1P47985 274 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 NPBWR2P48146 333 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 SUB1P53999 127 aaKnown RBP eCLIP2.92□□□□□ -1.94
VPS13A-209ENST00000467124 CRISP1P54107 249 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 IRF8Q02556 426 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 LIPEQ05469 1076 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ARHGAP19Q14CB8 494 aa2.92□□□□□ -1.94
VPS13A-209ENST00000467124 ZSCAN26Q16670 478 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms