RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ASF1BQ9NVP2 202 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.33□□□□□ -2.04
XRN1-206ENST00000467077 CNOT2Q9NZN8 540 aaKnown RBP2.33□□□□□ -2.04
XRN1-206ENST00000467077 TMEM9Q9P0T7 183 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CIDEBQ9UHD4 219 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 SLC9A8Q9Y2E8 581 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 OR51B4Q9Y5P0 310 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CCDC88CQ9P219 2028 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 LRRK2Q5S007 2527 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 ITPR3Q14573 2671 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 IGHV1OR21-1A0A087WYE8 117 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ARGFXA6NJG6 315 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 PDXKO00764 312 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 EI24O14681 340 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 POLR1CO15160 346 aaPredicted RBP2.32□□□□□ -2.04
XRN1-206ENST00000467077 CFLARO15519 480 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 CALUO43852 315 aaPredicted RBP2.32□□□□□ -2.04
XRN1-206ENST00000467077 DUSP14O95147 198 aaKnown RBP2.32□□□□□ -2.04
XRN1-206ENST00000467077 ECDO95905 644 aaPredicted RBP2.32□□□□□ -2.04
XRN1-206ENST00000467077 TGFAP01135 160 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 IGHV3-9P01782 118 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 UGT2B4P06133 528 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 GSTA1P08263 222 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 SLC35E2P0CK97 266 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 THRAP10827 490 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 LAMP1P11279 417 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 COX6B1P14854 86 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 CYP11B1P15538 503 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ZNF17P17021 662 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ELK1P19419 428 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 F8A1P23610 371 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 CCR1P32246 355 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 MAGEA4P43358 317 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 GNPDA1P46926 289 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 SLC6A8P48029 635 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 SLC7A2P52569 658 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 YWHAEP62258 255 aaKnown RBP2.32□□□□□ -2.04
XRN1-206ENST00000467077 MYBPC1Q00872 1141 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 CUL2Q13617 745 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 CD226Q15762 336 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 CHRNA6Q15825 494 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ZSWIM7Q19AV6 140 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 TOR1AIP1Q5JTV8 583 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 TAF3Q5VWG9 929 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 IL23RQ5VWK5 629 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 KCTD16Q68DU8 428 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ATRAIDQ6UW56 229 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 FAM159AQ6UWV7 190 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 APOOLQ6UXV4 268 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 LRRC31Q6UY01 552 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 SPNS3Q6ZMD2 512 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ADAMTSL5Q6ZMM2 481 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 SETD3Q86TU7 594 aaPredicted RBP2.32□□□□□ -2.04
XRN1-206ENST00000467077 IQCKQ8N0W5 287 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 KDM8Q8N371 416 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 GPR137CQ8N3F9 429 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 GPATCH11Q8N954 259 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 DCAF4L2Q8NA75 395 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 FBXL13Q8NEE6 735 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 OR10G6Q8NH81 332 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 LINC01006Q8NI28 216 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 CT55Q8WUE5 264 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 PATE1Q8WXA2 126 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 OR1E3Q8WZA6 343 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ELMO2Q96JJ3 720 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 SAMD8Q96LT4 415 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 FAM111AQ96PZ2 611 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 NDUFAF3Q9BU61 184 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 GSDMCQ9BYG8 508 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ATG10Q9H0Y0 220 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ING2Q9H160 280 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 C1orf21Q9H246 121 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ALG9Q9H6U8 611 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 POPDC2Q9HBU9 364 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 TIGARQ9NQ88 270 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 DMAC2Q9NW81 257 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 DDIT4Q9NX09 232 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 RAB20Q9NX57 234 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 IL20RAQ9UHF4 553 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 KIAA1257Q9ULG3 409 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 SMC3Q9UQE7 1217 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 C2CD3Q4AC94 2353 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 SPTAN1Q13813 2472 aaKnown RBP2.32□□□□□ -2.04
XRN1-206ENST00000467077 TLN1Q9Y490 2541 aaKnown RBP2.32□□□□□ -2.04
XRN1-206ENST00000467077 ABCA12Q86UK0 2595 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 HIVEP1P15822 2718 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 FBN3Q75N90 2809 aa2.32□□□□□ -2.04
XRN1-206ENST00000467077 ARID1AO14497 2285 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 ZNF469Q96JG9 3925 aaPredicted RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 MDC1Q14676 2089 aaKnown RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 PIKFYVEQ9Y2I7 2098 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 NPIPA5A0A0B4J1W7 369 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 A0A0J9YVX5 310 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 PVALEFA0A1B0GWK0 134 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 A8MX80 341 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 NPIPA5E9PKD4 350 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 H3BMH7 237 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 MAPK13O15264 365 aa2.31□□□□□ -2.04
XRN1-206ENST00000467077 POLR2DO15514 142 aaKnown RBP2.31□□□□□ -2.04
XRN1-206ENST00000467077 BUB1O43683 1085 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms