RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 PDLIM1O00151 329 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 LYZL6O75951 148 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 FCGR1AP12314 374 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 COX5AP20674 150 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 IL32P24001 234 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 CCKARP32238 428 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 KIR2DL3P43628 341 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 DAP3P51398 398 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 ARHGDIAP52565 204 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 FOXG1P55316 489 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 RPL27P61353 136 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 ANKRD34AQ69YU3 496 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 HIST2H2BCQ6DN03 193 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 SMARCD3Q6STE5 483 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 GPR137CQ8N3F9 429 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF433Q8N7K0 673 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 STEAP2Q8NFT2 490 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 OR6N1Q8NGY5 312 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 LINC01560Q8TB33 94 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 ASB10Q8WXI3 467 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 KISS1RQ969F8 398 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF566Q969W8 418 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 SLC25A44Q96H78 314 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 ALKBH3Q96Q83 286 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 POLDIP3Q9BY77 421 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 OR10A4Q9H209 315 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 NTN4Q9HB63 628 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 TAS2R16Q9NYV7 291 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 PDP1Q9P0J1 537 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 NDRG3Q9UGV2 375 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF346Q9UL40 294 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 MGAT4BQ9UQ53 548 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 CIB4A0PJX0 185 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ARRDC5A6NEK1 342 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF587BE7ETH6 402 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 M0R3G1 203 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 IGHMP01871 453 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 CD14P08571 375 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ITGA5P08648 1049 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ACADSP16219 412 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 MPGP29372 298 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 CSNK1A1P48729 337 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 FXYD6P3P58550 94 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ERVK-25P63136 954 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ROR2Q01974 943 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 TOP3AQ13472 1001 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 RFX4Q33E94 735 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 PHYHD1Q5SRE7 291 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ARMC4Q5T2S8 1044 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 C9orf135Q5VTT2 229 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 HMBOX1Q6NT76 420 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ZFP1Q6P2D0 407 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 SHQ1Q6PI26 577 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 THSD4Q6ZMP0 1018 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 LINGO2Q7L985 606 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 BHLHA15Q7RTS1 189 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 HDDC2Q7Z4H3 204 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 AMIGO2Q86SJ2 522 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 HS3ST5Q8IZT8 346 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 FANK1Q8TC84 345 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 LRTOMTQ8WZ04 291 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 TMEM54Q969K7 222 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 GTPBP3Q969Y2 492 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 NRBF2Q96F24 287 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 WFIKKN1Q96NZ8 548 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 FEVQ99581 238 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 BDH2Q9BUT1 245 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 DGCR6LQ9BY27 220 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 ACTR6Q9GZN1 396 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 OR52D1Q9H346 318 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 SLC24A3Q9HC58 644 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 B3GAT2Q9NPZ5 323 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 STX18Q9P2W9 335 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 IL20RAQ9UHF4 553 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 COL12A1Q99715 3063 aa12.73□□□□□ -0.37
DNMT3A-208ENST00000466601 SH3D21A4FU49 640 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 ERICH4A6NGS2 130 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 ANKRD65E5RJM6 399 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 RPL36A-HNRNPH2H7BZ11 118 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 ENTPD5O75356 428 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 TRMUO75648 421 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 RAD51DO75771 328 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 IGHG1P01857 330 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 PGA4P0DJD7 388 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 PGA3P0DJD8 388 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 PPP3CBP16298 524 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 GSTM3P21266 225 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 PRKACGP22612 351 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 ACVR1BP36896 505 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 TGFBR3Q03167 851 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 RUNX1T1Q06455 604 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 DPY19L2P2Q6ZN68 376 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF620Q6ZNG0 422 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 RASSF6Q6ZTQ3 369 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 OR5K1Q8NHB7 308 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 FAM222BQ8WU58 562 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 S100PBPQ96BU1 408 aa12.72□□□□□ -0.37
DNMT3A-208ENST00000466601 SAMD8Q96LT4 415 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms