RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MMEL1Q495T6 779 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 RUNDC3AQ59EK9 446 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 ENTPD8Q5MY95 495 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 COMTD1Q86VU5 262 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 TMEM123Q8N131 208 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 OR5J2Q8NH18 312 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 SPATA3Q8NHX4 192 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 NEU4Q8WWR8 484 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-206ENST00000466591 RASSF5Q8WWW0 418 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 TMEM158Q8WZ71 300 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 FOXN4Q96NZ1 517 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 MOGAT1Q96PD6 335 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 CGREF1Q99674 301 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 NELFAQ9H3P2 528 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 SEC61A2Q9H9S3 476 aa15.2■□□□□ 0.02
COL7A1-206ENST00000466591 PLCE1Q9P212 2302 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 TRBV5-3A0A0A0MS03 114 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 IGHV2OR16-5A0A0B4J2B6 119 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 LRRN3E7EW58 273 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 MS4A18H0YCH9 400 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 FMO6PO60774 539 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 UBL3O95164 117 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 HPRP00739 348 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 IGHV4-31P0DP07 118 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 DAOP14920 347 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 BIDP55957 195 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 ADRM1Q16186 407 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 MS4A18Q3C1V0 323 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 DLEU7Q6UYE1 221 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 PXKQ7Z7A4 578 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 CKAP2Q8WWK9 683 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 ZNF837Q96EG3 531 aaPredicted RBP15.19■□□□□ 0.02
COL7A1-206ENST00000466591 TXNDC15Q96J42 360 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 LRR1Q96L50 414 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 SIKE1Q9BRV8 207 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 NOX3Q9HBY0 568 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 NANSQ9NR45 359 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 FBXL3Q9UKT7 428 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
COL7A1-206ENST00000466591 ZANQ9Y493 2812 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 ABCA1O95477 2261 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 PLPP3O14495 311 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 FARS2O95363 451 aaKnown RBP15.18■□□□□ 0.02
COL7A1-206ENST00000466591 CH25HO95992 272 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 IFNGR1P15260 489 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 SRD5A1P18405 259 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 RPS23P62266 143 aaKnown RBP15.18■□□□□ 0.02
COL7A1-206ENST00000466591 HGFACQ04756 655 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 CYLC2Q14093 348 aaPredicted RBP15.18■□□□□ 0.02
COL7A1-206ENST00000466591 PHYHD1Q5SRE7 291 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 NANOGNBQ7Z5D8 188 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 OR10A6Q8NH74 314 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 ADAMTS16Q8TE57 1224 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 ZNF566Q969W8 418 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 SLC41A3Q96GZ6 507 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 ARHGDIGQ99819 225 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 FOXB1Q99853 325 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 SH3GL1Q99961 368 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 BPESC1Q9GZL8 116 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 RNF121Q9H920 327 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 SLC7A7Q9UM01 511 aa15.18■□□□□ 0.02
COL7A1-206ENST00000466591 ALPK2Q86TB3 2170 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 A0A096LNT2 108 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 TRAPPC13A5PLN9 417 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 MCIDASD6RGH6 385 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 M0R233 179 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 TGFAP01135 160 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 ADRA2AP08913 450 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 GIPRP48546 466 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 CHN2P52757 468 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 RAB1AP62820 205 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 DUSP7Q16829 419 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 SLC35D2Q76EJ3 337 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 MYPOPQ86VE0 399 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-206ENST00000466591 PTOV1Q86YD1 416 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 DPP10Q8N608 796 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 OR6T1Q8NGN1 323 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 ECSITQ9BQ95 431 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 TPK1Q9H3S4 243 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 SLC52A3Q9NQ40 469 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 TMEM160Q9NX00 188 aa15.17■□□□□ 0.02
COL7A1-206ENST00000466591 A0A1W2PPW3 197 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 FZD7O75084 574 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 TROVE2P10155 538 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL7A1-206ENST00000466591 PCGF2P35227 344 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 CLRN1P58418 232 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 TAS2R41P59536 307 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 SELENOVP59797 346 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 SELPLGQ14242 412 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 TSPEARQ8WU66 669 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 MS4A3Q96HJ5 214 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 MPP4Q96JB8 637 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 DENND2DQ9H6A0 471 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-206ENST00000466591 MRGBPQ9NV56 204 aa15.16■□□□□ 0.02
COL7A1-206ENST00000466591 SONP18583 2426 aaKnown RBP15.16■□□□□ 0.02
COL7A1-206ENST00000466591 IGHV4-61A0A0C4DH41 118 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 ZNF503-AS2A6NEH8 195 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 BLOC1S5-TXNDC5H3BN57 136 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 PHF1O43189 567 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-206ENST00000466591 TPST2O60704 377 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms