RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 OR11A1Q9GZK7 315 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 ENKD1Q9H0I2 346 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 RPH3AQ9Y2J0 694 aaPredicted RBP16.78■□□□□ 0.28
CAPN3-209ENST00000466222 PCDHGB7Q9Y5F8 929 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 N6AMT1Q9Y5N5 214 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 APC2O95996 2303 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 EFNA2O43921 213 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 SLC25A12O75746 678 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 OPN1LWP04000 364 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 PLPPR5Q32ZL2 321 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 GXYLT1Q4G148 440 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 OR13C2Q8NGS9 318 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 POC1BQ8TC44 478 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 ACOT12Q8WYK0 555 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 FAM122AQ96E09 287 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 ST6GAL2Q96JF0 529 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 HS6ST2Q96MM7 605 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 UBL7Q96S82 380 aaPredicted RBP16.78■□□□□ 0.28
CAPN3-209ENST00000466222 C11orf54Q9H0W9 315 aaPredicted RBP16.78■□□□□ 0.28
CAPN3-209ENST00000466222 TP63Q9H3D4 680 aaPredicted RBP16.78■□□□□ 0.28
CAPN3-209ENST00000466222 TNFRSF10DQ9UBN6 386 aa16.78■□□□□ 0.28
CAPN3-209ENST00000466222 TMED7-TICAM2A0A0A6YYA0 188 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 TMEM72A0PK05 275 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 CENPXA8MT69 81 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 SLC19A2O60779 497 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 TRIM3O75382 744 aaPredicted RBP16.77■□□□□ 0.28
CAPN3-209ENST00000466222 APOL3O95236 402 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 PNMTP11086 282 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 CXCR1P25024 350 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 RBM34P42696 430 aaKnown RBP16.77■□□□□ 0.28
CAPN3-209ENST00000466222 FXYD6P3P58550 94 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 SF3B4Q15427 424 aaKnown RBP eCLIP16.77■□□□□ 0.28
CAPN3-209ENST00000466222 TAB1Q15750 504 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 TIGD3Q6B0B8 471 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 LHFPL3Q86UP9 236 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 ATP6V1C2Q8NEY4 427 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 OR1J4Q8NGS1 313 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 OR51A7Q8NH64 312 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 ZNF649Q9BS31 505 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 DDX28Q9NUL7 540 aaKnown RBP16.77■□□□□ 0.28
CAPN3-209ENST00000466222 TMED7Q9Y3B3 224 aa16.77■□□□□ 0.28
CAPN3-209ENST00000466222 TRAV27A0A087WT01 109 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 UNC119BA6NIH7 251 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 GABRPO00591 440 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 SUSD5O60279 629 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 CH25HO95992 272 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 SAGP10523 405 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 CD53P19397 219 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 MSX1P28360 303 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 ZNF41P51814 821 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 NKX2-5P52952 324 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 CTBP2P56545 445 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 TRIQKQ629K1 86 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 MZT2BQ6NZ67 158 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 ZNF322Q6U7Q0 402 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 CXXC5Q7LFL8 322 aaKnown RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 SHFQ7M4L6 423 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 GRINAQ7Z429 371 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 SYT14Q8NB59 555 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 OR4F15Q8NGB8 312 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 OR52L1Q8NGH7 329 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 NEIL3Q8TAT5 605 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 ENKURQ8TC29 256 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 MOGAT1Q96PD6 335 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 ATF6BQ99941 703 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 KCNN2Q9H2S1 579 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 PPP1R3EQ9H7J1 279 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 RNF121Q9H920 327 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 INPP5EQ9NRR6 644 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 ABI3Q9P2A4 366 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 RBMX2Q9Y388 322 aaKnown RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 LRRC3CA6NJW4 275 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 FAM47E-STBD1D6RA91 191 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 J3QRE1 110 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 PAICSP22234 425 aaKnown RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 MYL9P24844 172 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 HLA-DMAP28067 261 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 ATP6V1E1P36543 226 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 CASRP41180 1078 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 CAPZA2P47755 286 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 POLR2HP52434 150 aaKnown RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 SUMO3P55854 103 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 LTBQ06643 244 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 TMPRSS11FQ6ZWK6 438 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 GPALPP1Q8IXQ4 340 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 C19orf18Q8NEA5 215 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 SPRYD4Q8WW59 207 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 SLC7A6Q92536 515 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 TAAR8Q969N4 342 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 CCDC86Q9H6F5 360 aaKnown RBP16.76■□□□□ 0.27
CAPN3-209ENST00000466222 TMEM185BQ9H7F4 350 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 TMEM5Q9Y2B1 443 aa16.76■□□□□ 0.27
CAPN3-209ENST00000466222 MED13Q9UHV7 2174 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 OR5H15A6NDH6 313 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 LALBAP00709 142 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 PEPDP12955 493 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 MAP2K3P46734 347 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 EVX1P49640 407 aa16.75■□□□□ 0.27
CAPN3-209ENST00000466222 C19orf57Q0VDD7 668 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms