RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TNFAIP8O95379 198 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 AHSA1O95433 338 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 PMS2P2O95744 297 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 CH25HO95992 272 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 IGHMP01871 453 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 HIST1H2ABP04908 130 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 HK1P19367 917 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 EPHA2P29317 976 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 UQCRC1P31930 480 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 IDUAP35475 653 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 MASP1P48740 699 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 DNASE1L1P49184 302 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 CCR4P51679 360 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 AGFG1P52594 562 aaKnown RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 FXYD6P3P58550 94 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 B3GALT5-AS1P59052 145 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TUBA4AP68366 448 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 H3F3AP84243 136 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TLE3Q04726 772 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 CD47Q08722 323 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 FOXF1Q12946 379 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 GINS1Q14691 196 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 SLC10A1Q14973 349 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 MAD2L1BPQ15013 274 aaPredicted RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 INPP5JQ15735 1006 aaPredicted RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 INAQ16352 499 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 SGCBQ16585 318 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 DEFB109BQ30KR1 87 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 KCTD21Q4G0X4 260 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 SYT14P1Q58G82 188 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 ZNF766Q5HY98 468 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 ZNF362Q5T0B9 420 aaPredicted RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 ATP1A1-AS1Q5TC04 95 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 PRAMEF20Q5VT98 475 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 C1orf140Q5VVS0 124 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 RNLSQ5VYX0 342 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 GPR139Q6DWJ6 353 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 OR5M10Q6IEU7 315 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 LAIR2Q6ISS4 152 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 KRT80Q6KB66 452 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 ACSM5Q6NUN0 579 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 NHLRC1Q6VVB1 395 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 LINC00696Q6ZRV3 163 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 Q6ZS92 163 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TMPPEQ6ZT21 453 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 HIST3H2AQ7L7L0 130 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 FAM122BQ7Z309 247 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 GALNT5Q7Z7M9 940 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 EGFL6Q8IUX8 553 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 CCDC71Q8IV32 467 aaPredicted RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 ENTHD1Q8IYW4 607 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 ZADH2Q8N4Q0 377 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TMCO5AQ8N6Q1 288 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 FAM98AQ8NCA5 519 aaKnown RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 OR2T33Q8NG76 320 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 OR5J2Q8NH18 312 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 IL17DQ8TAD2 202 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TEX47Q8TBZ9 253 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 HIST1H2ACQ93077 130 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 MIB2Q96AX9 1013 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 KTI12Q96EK9 354 aaPredicted RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 C5orf34Q96MH7 638 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 ZNF570Q96NI8 536 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 SLC38A2Q96QD8 506 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 ZNF747Q9BV97 191 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TSSK6Q9BXA6 273 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 RIBC2Q9H4K1 309 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 DUSP21Q9H596 190 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 ZDHHC11Q9H8X9 412 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 MCCC2Q9HCC0 563 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 NANSQ9NR45 359 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 CMC2Q9NRP2 79 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 DEPPQ9NTK1 212 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 PAQR5Q9NXK6 330 aaPredicted RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 ZNF226Q9NYT6 803 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TAS2R5Q9NYW4 299 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 B4GALT7Q9UBV7 327 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 KLHL21Q9UJP4 597 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TUBD1Q9UJT1 453 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 B3GALT5Q9Y2C3 310 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TPRKBQ9Y3C4 175 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 PCDHGB1Q9Y5G3 927 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 A0A1B0GVC2 190 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 UBE2QL1A1L167 161 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 OR2M5A3KFT3 312 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PINLYPA6NC86 204 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 LIPT2A6NK58 231 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 C17orf51A8MQB3 221 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 MS4A18H0YCH9 400 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 H3BN98 237 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 MKRN2OSH3BPM6 223 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PLPP3O14495 311 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 SURF4O15260 269 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 PIP5K1CO60331 668 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 WBP4O75554 376 aaKnown RBP4.9□□□□□ -1.63
VPS41-211ENST00000466017 TOX4O94842 621 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 ACTL6AO96019 429 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 IGHG3P01860 377 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 LYNP07948 512 aa4.9□□□□□ -1.63
VPS41-211ENST00000466017 CD14P08571 375 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms