RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ALPK1Q96QP1 1244 aa17.86■□□□□ 0.45
SKA3-205ENST00000465471 IGHMP01871 453 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 ZNF26P17031 533 aaPredicted RBP17.85■□□□□ 0.45
SKA3-205ENST00000465471 KRTAP10-9P60411 292 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 NOTCH2Q04721 2471 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 MELKQ14680 651 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 LAPTM4AQ15012 233 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 ALG10Q5BKT4 473 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 CCDC121Q6ZUS5 278 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 SSX8Q7RTT4 187 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 ZER1Q7Z7L7 766 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 GPR137CQ8N3F9 429 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 C17orf78Q8N4C9 275 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 ZC3HAV1LQ96H79 300 aaKnown RBP17.85■□□□□ 0.45
SKA3-205ENST00000465471 TNFRSF13CQ96RJ3 184 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 GPA33Q99795 319 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 GPR35Q9HC97 309 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 SIGLEC7Q9Y286 467 aa17.85■□□□□ 0.45
SKA3-205ENST00000465471 A0A1W2PRG6 482 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 CIB4A0PJX0 185 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 ZNF726A6NNF4 738 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 CASKO14936 926 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 PTP4A3O75365 173 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 KRT33AO76009 404 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 PGA4P0DJD7 388 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 PGA3P0DJD8 388 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 DAP3P51398 398 aaKnown RBP17.84■□□□□ 0.45
SKA3-205ENST00000465471 SH3BGRP55822 239 aaPredicted RBP17.84■□□□□ 0.45
SKA3-205ENST00000465471 ROR2Q01974 943 aaKnown RBP17.84■□□□□ 0.45
SKA3-205ENST00000465471 TGFBR3Q03167 851 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 CAMK2DQ13557 499 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 ACKR1Q16570 336 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 ZBED5Q49AG3 693 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 ARMC4Q5T2S8 1044 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 C1QTNF12Q5T7M4 302 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 C9orf135Q5VTT2 229 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 CARD17Q5XLA6 110 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 OR2T5Q6IEZ7 315 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 PAPD5Q8NDF8 572 aaKnown RBP17.84■□□□□ 0.45
SKA3-205ENST00000465471 OR1K1Q8NGR3 316 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 OR2T29Q8NH02 315 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 OR51A7Q8NH64 312 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 ASB10Q8WXI3 467 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 TMEM54Q969K7 222 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 SLC25A44Q96H78 314 aaPredicted RBP17.84■□□□□ 0.45
SKA3-205ENST00000465471 CHID1Q9BWS9 393 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 TXNIPQ9H3M7 391 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 NELFAQ9H3P2 528 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 KRCC1Q9NPI7 259 aaPredicted RBP17.84■□□□□ 0.45
SKA3-205ENST00000465471 VNN3Q9NY84 501 aa17.84■□□□□ 0.45
SKA3-205ENST00000465471 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.84■□□□□ 0.45
SKA3-205ENST00000465471 CENPBD1B2RD01 187 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 EBAG9O00559 213 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 BCL10O95999 233 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 FPR3P25089 353 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 FXYD6P3P58550 94 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 PRPS1P60891 318 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 TAF11Q15544 211 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 STK11Q15831 433 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 HIST3H3Q16695 136 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 ZNF770Q6IQ21 691 aaPredicted RBP17.83■□□□□ 0.44
SKA3-205ENST00000465471 HMBOX1Q6NT76 420 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 C1orf94Q6P1W5 598 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 SPATA24Q86W54 205 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 WDR31Q8NA23 367 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 UTP4Q969X6 686 aaKnown RBP17.83■□□□□ 0.44
SKA3-205ENST00000465471 ZNF837Q96EG3 531 aaPredicted RBP17.83■□□□□ 0.44
SKA3-205ENST00000465471 RSRC1Q96IZ7 334 aaKnown RBP17.83■□□□□ 0.44
SKA3-205ENST00000465471 MRPL13Q9BYD1 178 aaKnown RBP17.83■□□□□ 0.44
SKA3-205ENST00000465471 CRLF2Q9HC73 371 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 SLC17A5Q9NRA2 495 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 TMCC3Q9ULS5 477 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 AURKCQ9UQB9 309 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 SLC25A15Q9Y619 301 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 CSMD2Q7Z408 3487 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 CSMD1Q96PZ7 3565 aa17.83■□□□□ 0.44
SKA3-205ENST00000465471 LRBAP50851 2863 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 A0A1W2PPR1 153 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 M0R3G1 203 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 TNFRSF11BO00300 401 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 GSSP48637 474 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 CSNK1A1P48729 337 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 RUNX1T1Q06455 604 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 GK3PQ14409 553 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 PPA1Q15181 289 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 CEACAM16Q2WEN9 425 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 BEX5Q5H9J7 111 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 PGBD2Q6P3X8 592 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 ZNF627Q7L945 461 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 HDDC2Q7Z4H3 204 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 TMEM200AQ86VY9 491 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 WFDC8Q8IUA0 241 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 LINC00471Q8N535 108 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 MAGEE2Q8TD90 523 aaPredicted RBP17.82■□□□□ 0.44
SKA3-205ENST00000465471 BCL2L2Q92843 193 aaPredicted RBP17.82■□□□□ 0.44
SKA3-205ENST00000465471 ZNF566Q969W8 418 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 SLCO4A1Q96BD0 722 aa17.82■□□□□ 0.44
SKA3-205ENST00000465471 GPX7Q96SL4 187 aaPredicted RBP17.82■□□□□ 0.44
SKA3-205ENST00000465471 CLEC4MQ9H2X3 399 aaPredicted RBP17.82■□□□□ 0.44
SKA3-205ENST00000465471 CCM2LQ9NUG4 571 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms