RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 KLHL21Q9UJP4 597 aa11.92□□□□□ -0.5
ATF3-208ENST00000465155 ING1Q9UK53 422 aaPredicted RBP11.92□□□□□ -0.5
ATF3-208ENST00000465155 HSPE1-MOB4S4R3N1 261 aa11.92□□□□□ -0.5
ATF3-208ENST00000465155 SLC35F4A4IF30 521 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 FAM183AA6NL82 134 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 H7C1C5 153 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 PRRG2O14669 202 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 SLC19A2O60779 497 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 CDKN2AP42771 156 aaKnown RBP11.91□□□□□ -0.5
ATF3-208ENST00000465155 ISL1P61371 349 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 LCN6P62502 163 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 EFNB1P98172 346 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 RBPJQ06330 500 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 CD47Q08722 323 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 CRMP1Q14194 572 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 MAD2L1BPQ15013 274 aaPredicted RBP11.91□□□□□ -0.5
ATF3-208ENST00000465155 PDK3Q15120 406 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 SF3B4Q15427 424 aaKnown RBP eCLIP11.91□□□□□ -0.57e-8■■■■■ 37.8
ATF3-208ENST00000465155 GTF2IRD2BQ6EKJ0 949 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 LEG1Q6P5S2 330 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 GTF2IRD2Q86UP8 949 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 ZGRF1Q86YA3 2104 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 ZIC4Q8N9L1 334 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 CYB561A3Q8NBI2 242 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 SLC37A3Q8NCC5 494 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 CNIH3Q8TBE1 160 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 TRUB1Q8WWH5 349 aaKnown RBP11.91□□□□□ -0.5
ATF3-208ENST00000465155 OTULINQ96BN8 352 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 RNF122Q9H9V4 155 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 CALHM2Q9HA72 323 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 CLEC4AQ9UMR7 237 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 ZNF835Q9Y2P0 537 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 PCDHGB5Q9Y5G0 923 aa11.91□□□□□ -0.5
ATF3-208ENST00000465155 SHANK1Q9Y566 2161 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 IGKV3D-15A0A087WSY6 115 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 A6NIZ1 184 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 ZNF726A6NNF4 738 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 MPZL2O60487 215 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 ACVR2AP27037 513 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 PTGER4P35408 488 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 RAP1BP61224 184 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 RAP1AP62834 184 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 RUNX1T1Q06455 604 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 CAMK2DQ13557 499 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 C1orf185Q5T7R7 199 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 FAM205BPQ63HN1 556 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 NSUN5P2Q63ZY6 315 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 C3P1Q6ZMU1 363 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 HDDC2Q7Z4H3 204 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 BCDIN3DQ7Z5W3 292 aaKnown RBP11.9□□□□□ -0.5
ATF3-208ENST00000465155 ADCK1Q86TW2 530 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 CPOQ8IVL8 374 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 TUSC5Q8IXB3 177 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 MARVELD2Q8N4S9 558 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 NPEPL1Q8NDH3 523 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 RHOXF1Q8NHV9 184 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 HDAC2Q92769 488 aaKnown RBP11.9□□□□□ -0.5
ATF3-208ENST00000465155 WNT2BQ93097 391 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 ADAD1Q96M93 576 aaKnown RBP11.9□□□□□ -0.5
ATF3-208ENST00000465155 FN3KQ9H479 309 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 MED20Q9H944 212 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 BCO1Q9HAY6 547 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 HINT3Q9NQE9 182 aaKnown RBP11.9□□□□□ -0.5
ATF3-208ENST00000465155 UBAP1Q9NZ09 502 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 EMC3Q9P0I2 261 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 LRCH1Q9Y2L9 728 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 MED12LQ86YW9 2145 aa11.9□□□□□ -0.5
ATF3-208ENST00000465155 OR6C68A6NDL8 312 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 CD8B2A6NJW9 211 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 PRR23D1E9PI22 279 aaPredicted RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 GPR171O14626 319 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 AKAP8O43823 692 aaKnown RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 TRMUO75648 421 aaKnown RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 RENP00797 406 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 PRR23D2P0DMB1 279 aaPredicted RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 GABRB1P18505 474 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 PAICSP22234 425 aaKnown RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 SNRPGP62308 76 aaKnown RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 DBPQ10586 325 aaPredicted RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 CDK5R2Q13319 367 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 ITGADQ13349 1161 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 CARD17Q5XLA6 110 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 RTL6Q6ICC9 239 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 NIPAL3Q6P499 406 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 PLBD1Q6P4A8 553 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 CXXC5Q7LFL8 322 aaKnown RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 DOLPP1Q86YN1 238 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 FAM26EQ8N5C1 309 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 C9orf106Q8NAJ2 232 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 SYT14Q8NB59 555 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 ST6GALNAC3Q8NDV1 305 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 OR6X1Q8NH79 312 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 APH1BQ8WW43 257 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 ZNF566Q969W8 418 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 SLC25A44Q96H78 314 aaPredicted RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 LRR1Q96L50 414 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 OR2M2Q96R28 347 aa11.89□□□□□ -0.51
ATF3-208ENST00000465155 TP63Q9H3D4 680 aaPredicted RBP11.89□□□□□ -0.51
ATF3-208ENST00000465155 DNAJC27Q9NZQ0 273 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms