RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 IFT52Q9Y366 437 aa12.51□□□□□ -0.41
MCF2L-220ENST00000464800 PCDHGB1Q9Y5G3 927 aa12.51□□□□□ -0.41
MCF2L-220ENST00000464800 GPR45Q9Y5Y3 372 aa12.51□□□□□ -0.41
MCF2L-220ENST00000464800 A0A0G2JPF8 293 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 HNRNPCL2B2RXH8 293 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 HNRNPCL3B7ZW38 293 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 J3QLI3 93 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 SDHDO14521 159 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 TMPRSS2O15393 492 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 HNRNPCL1O60812 293 aaKnown RBP12.5□□□□□ -0.41
MCF2L-220ENST00000464800 UBL3O95164 117 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 MPZL1O95297 269 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 HNRNPCL4P0DMR1 293 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 BST1Q10588 318 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 MFSD13AQ14CX5 517 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 ALKBH6Q3KRA9 238 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 NET1Q7Z628 596 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-220ENST00000464800 MREGQ8N565 214 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 SLC35B4Q969S0 331 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 TMEM19Q96HH6 336 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 LRR1Q96L50 414 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 TMPRSS13Q9BYE2 586 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 ULBP2Q9BZM5 246 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 ZNF696Q9H7X3 374 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 C12orf10Q9HB07 376 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 KCNK9Q9NPC2 374 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 SLC6A13Q9NSD5 602 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 THUMPD1Q9NXG2 353 aaKnown RBP12.5□□□□□ -0.41
MCF2L-220ENST00000464800 ZNF224Q9NZL3 707 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 GPR160Q9UJ42 338 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 PKD1L1Q8TDX9 2849 aa12.5□□□□□ -0.41
MCF2L-220ENST00000464800 WNK2Q9Y3S1 2297 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 TRAV36DV7A0A075B6V5 113 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 PLPP2O43688 288 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 CDC14BO60729 498 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 ANP32DO95626 131 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 HPRP00739 348 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 ADRA2CP18825 462 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 CBLP22681 906 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 EPHA3P29320 983 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 MAGEB1P43366 347 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 AQP5P55064 265 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 RAB1AP62820 205 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 MVKQ03426 396 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 MMEL1Q495T6 779 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 AVPI1Q5T686 147 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 DCAF12L2Q5VW00 463 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 RGS7BPQ6MZT1 257 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-220ENST00000464800 SHISA2Q6UWI4 295 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 OR6N1Q8NGY5 312 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 NANPQ8TBE9 248 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 SNX33Q8WV41 574 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 ZBTB9Q96C00 473 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 FOXB1Q99853 325 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
MCF2L-220ENST00000464800 EMC6Q9BV81 110 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 ZNF747Q9BV97 191 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 WDR55Q9H6Y2 383 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-220ENST00000464800 TPT1P8Q9HAU6 139 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 ESM1Q9NQ30 184 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 KLHL14Q9P2G3 628 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 CORINQ9Y5Q5 1042 aa12.49□□□□□ -0.41
MCF2L-220ENST00000464800 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 MS4A18H0YCH9 400 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 HLA-DOBP13765 273 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 SELENOVP59797 346 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 UBA52P62987 128 aaKnown RBP12.48□□□□□ -0.41
MCF2L-220ENST00000464800 CCL8P80075 99 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 RAB39AQ14964 217 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 MS4A18Q3C1V0 323 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 PCGF3Q3KNV8 242 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 PDLIM3Q53GG5 364 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-220ENST00000464800 TMEM154Q6P9G4 183 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 ZDHHC22Q8N966 263 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 GLB1L3Q8NCI6 653 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-220ENST00000464800 HINT3Q9NQE9 182 aaKnown RBP12.48□□□□□ -0.41
MCF2L-220ENST00000464800 DDX28Q9NUL7 540 aaKnown RBP12.48□□□□□ -0.41
MCF2L-220ENST00000464800 MED29Q9NX70 200 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 TAAR3PQ9P1P4 343 aa12.48□□□□□ -0.41
MCF2L-220ENST00000464800 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.48□□□□□ -0.414e-7■■□□□ 14
MCF2L-220ENST00000464800 V9GYY5 206 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-220ENST00000464800 A0A087WUJ7 227 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 A0A1B0GWA3 101 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 ZNF726A6NNF4 738 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 DEAF1O75398 565 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-220ENST00000464800 IL6P05231 212 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 ZCCHC18P0CG32 403 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 GATA3P23771 443 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 KLF3P57682 345 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-220ENST00000464800 TEKQ02763 1124 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 PUDPQ08623 228 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 ZP4Q12836 540 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 FOXL1Q12952 345 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 CAMK2DQ13557 499 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 PDCD4Q53EL6 469 aaKnown RBP12.47□□□□□ -0.41
MCF2L-220ENST00000464800 TNFAIP8L3Q5GJ75 292 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 ALG10BQ5I7T1 473 aa12.47□□□□□ -0.41
MCF2L-220ENST00000464800 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms