RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 STK35Q8TDR2 534 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 GPX8Q8TED1 209 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 DUSP19Q8WTR2 217 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 TM4SF19Q96DZ7 209 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 PTCHD1Q96NR3 888 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 MNTQ99583 582 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 ALG12Q9BV10 488 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 POTEKPQ9BYX7 375 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 POFUT1Q9H488 388 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 GAREM1Q9H706 876 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 RRAGCQ9HB90 399 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 TRPV4Q9HBA0 871 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 PHPT1Q9NRX4 125 aaPredicted RBP6.65□□□□□ -1.35
USP48-206ENST00000464577 MRM2Q9UI43 246 aaKnown RBP6.65□□□□□ -1.35
USP48-206ENST00000464577 ZNF107Q9UII5 783 aaPredicted RBP6.65□□□□□ -1.35
USP48-206ENST00000464577 MOKQ9UQ07 419 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 KCNK6Q9Y257 313 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 ADAM18Q9Y3Q7 739 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 HEBP2Q9Y5Z4 205 aa6.65□□□□□ -1.35
USP48-206ENST00000464577 TMEM82A0PJX8 343 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 TMEM218A2RU14 115 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 URADA6NGE7 173 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 TMEM212A6NML5 194 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 OR5K4A6NMS3 321 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 OR52A4PA6NMU1 304 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 OR4C45A6NMZ5 311 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 NUDT19A8MXV4 375 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 CDC40O60508 579 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP48-206ENST00000464577 DNAJB6O75190 326 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 CXCL14O95715 111 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 PAK4O96013 591 aaPredicted RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 WNT11O96014 354 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 OR8G3PP0DMU2 310 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 APEHP13798 732 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 ACHEP22303 614 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 GABRA3P34903 492 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 EMDP50402 254 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 TAS2R19P59542 299 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 ERVK-25P63136 954 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 MGAT2Q10469 447 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 PLA2G7Q13093 441 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 SNTB1Q13884 538 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 ZNF234Q14588 700 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 PRICKLE4Q2TBC4 344 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 PAN3Q58A45 887 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 VWA2Q5GFL6 755 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 FAM74A1Q5RGS3 127 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 LIPNQ5VXI9 398 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 PLPP4Q5VZY2 271 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 KIRREL2Q6UWL6 708 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 ENPP7Q6UWV6 458 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 PGAP1Q75T13 922 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 ZAR1Q86SH2 424 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 GABRG1Q8N1C3 465 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 TMEM185AQ8NFB2 350 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 STEAP2Q8NFT2 490 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 ZPLD1Q8TCW7 415 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 GPR148Q8TDV2 347 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 FGF13Q92913 245 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 RSPRY1Q96DX4 576 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 Q96M85 177 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 USB1Q9BQ65 265 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 SLC19A3Q9BZV2 496 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 CHST6Q9GZX3 395 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 TMEM185BQ9H7F4 350 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 SFXN1Q9H9B4 322 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 FKRPQ9H9S5 495 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 MBNL1Q9NR56 388 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 COA4Q9NYJ1 87 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 FRRS1LQ9P0K9 344 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 EPHA6Q9UF33 1036 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 MLXQ9UH92 298 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 CDV3Q9UKY7 258 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 ZNF337Q9Y3M9 751 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 HCFC2Q9Y5Z7 792 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 TRAV8-7A0A075B6U6 113 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 A0A087WUJ7 227 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 A0A1B0GVT2 93 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 ABHD14A-ACY1A0A1B0GW23 586 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 OR6C74A6NCV1 312 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 OR14I1A6ND48 311 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 OR5H14A6NHG9 310 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 LRRC72A6NJI9 287 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 TMEM200CA6NKL6 621 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 DISC1C4P0D8 188 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 ADAM11O75078 769 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 CD3DP04234 171 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 HLA-GP17693 338 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 SOX2P48431 317 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 LUMP51884 338 aaPredicted RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 PRPS1P60891 318 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 SNRPNP63162 240 aaKnown RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 HTRA4P83105 476 aaPredicted RBP6.64□□□□□ -1.35
USP48-206ENST00000464577 GUCA2AQ02747 115 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 MESP2Q0VG99 397 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 RAB11BQ15907 218 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 C10orf91Q5T1B1 145 aa6.64□□□□□ -1.35
USP48-206ENST00000464577 ELP2Q6IA86 826 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms