RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 LINGO2Q7L985 606 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 TMEM200AQ86VY9 491 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 SPATA24Q86W54 205 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 WFDC8Q8IUA0 241 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 WDFY1Q8IWB7 410 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 C20orf196Q8IYI0 205 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 ADGRG5Q8IZF4 528 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 C1orf162Q8NEQ5 155 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 OR13C2Q8NGS9 318 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 CANT1Q8WVQ1 401 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 MUCL1Q96DR8 90 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 CHID1Q9BWS9 393 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 GPR35Q9HC97 309 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 AURKCQ9UQB9 309 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 PRR14LQ5THK1 2151 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 ABCA4P78363 2273 aa12.76□□□□□ -0.37
SQSTM1-205ENST00000464493 TCRBV3S1A0A5B6 114 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 DEFB108AA8MXU0 73 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 M0R3G1 203 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 TNFRSF11BO00300 401 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 KLF4O43474 513 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 OR10H3O60404 316 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 HRGP04196 525 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 HOXB6P17509 224 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 IFNGR2P38484 337 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 LIMS1P48059 325 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 DAP3P51398 398 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 KRTAP10-9P60411 292 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 PRPS1P60891 318 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 MELKQ14680 651 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 PPA1Q15181 289 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 ACKR1Q16570 336 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 PHYHD1Q5SRE7 291 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 OR2T5Q6IEZ7 315 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 SSX8Q7RTT4 187 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 ZER1Q7Z7L7 766 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 OR6N1Q8NGY5 312 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 OR2T29Q8NH02 315 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 ZNF566Q969W8 418 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 SLC25A44Q96H78 314 aaPredicted RBP12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 POLDIP3Q9BY77 421 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 CLEC4MQ9H2X3 399 aaPredicted RBP12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 CRLF2Q9HC73 371 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 B3GAT2Q9NPZ5 323 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
SQSTM1-205ENST00000464493 HRNRQ86YZ3 2850 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 NPIPB13A6NJU9 1138 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 NPIPB4C9JG80 1138 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 MCIDASD6RGH6 385 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 SIAH2O43255 324 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 PTP4A3O75365 173 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 CSNK1A1P48729 337 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 SH3BGRP55822 239 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 CTXN1P60606 82 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 TAF11Q15544 211 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 CEACAM16Q2WEN9 425 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 ASRGL1Q7L266 308 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 C17orf78Q8N4C9 275 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 LRRC75AQ8NAA5 344 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 OR1K1Q8NGR3 316 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 OR52N5Q8NH56 324 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 ASB10Q8WXI3 467 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 ZNF837Q96EG3 531 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 PIK3IP1Q96FE7 263 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 BOD1Q96IK1 185 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 TXNIPQ9H3M7 391 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 REEP1Q9H902 201 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 NGBQ9NPG2 151 aa12.74□□□□□ -0.37
SQSTM1-205ENST00000464493 UNC119BA6NIH7 251 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 IGHG1P01857 330 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 PGA4P0DJD7 388 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 PGA3P0DJD8 388 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 ACADSP16219 412 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 HOXC12P31275 282 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 ERFP50548 548 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 CLRN1P58418 232 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 ARF1P84077 181 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 BEX5Q5H9J7 111 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 ARMC4Q5T2S8 1044 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 C1orf146Q5VVC0 180 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 C1orf94Q6P1W5 598 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 ANKRD16Q6P6B7 361 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 HDDC2Q7Z4H3 204 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 IGFN1Q86VF2 1251 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 LINC00471Q8N535 108 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 WDR31Q8NA23 367 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 OR4C15Q8NGM1 316 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 TMEM54Q969K7 222 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 RSRC1Q96IZ7 334 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 GPA33Q99795 319 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 ULBP2Q9BZM5 246 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 NDEL1Q9GZM8 345 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 YY1AP1Q9H869 796 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 SLC17A5Q9NRA2 495 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 GLTPQ9NZD2 209 aa12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 STX18Q9P2W9 335 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 ZNF346Q9UL40 294 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-205ENST00000464493 SIGLEC7Q9Y286 467 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms