RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ARPC4-TTLL3A0A0A6YYG9 625 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 TRIM64A6NGJ6 449 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 TRIM64BA6NI03 449 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 ZNF726A6NNF4 738 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 ZNF99A8MXY4 864 aaPredicted RBP11.3□□□□□ -0.6
XRN1-203ENST00000463916 ATP6V1G2-DDX39BF2Z307 99 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 AKAP8O43823 692 aaKnown RBP11.3□□□□□ -0.6
XRN1-203ENST00000463916 NDUFS7O75251 213 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 CELA3BP08861 270 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 THRBP10828 461 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
XRN1-203ENST00000463916 ATP5J2P56134 94 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 MELKQ14680 651 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 PRSS57Q6UWY2 283 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 DTX2Q86UW9 622 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 HSH2DQ96JZ2 352 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 PRRC1Q96M27 445 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 TRAF4Q9BUZ4 470 aaPredicted RBP11.3□□□□□ -0.6
XRN1-203ENST00000463916 SPAG4Q9NPE6 437 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 OBP2BQ9NPH6 170 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 POU2F3Q9UKI9 436 aa11.3□□□□□ -0.6
XRN1-203ENST00000463916 DYNC1I1O14576 645 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 OR7A10O76100 309 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 PRSS23O95084 383 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 HIST1H2ABP04908 130 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 IFNW1P05000 195 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 F13BP05160 661 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 TTKP33981 857 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 AQP2P41181 271 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 UBE2NP61088 152 aaKnown RBP11.29□□□□□ -0.6
XRN1-203ENST00000463916 RUNX1T1Q06455 604 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
XRN1-203ENST00000463916 LAPTM4AQ15012 233 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 LRFN4Q6PJG9 635 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 HIST3H2AQ7L7L0 130 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 OR6X1Q8NH79 312 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 MOSPD2Q8NHP6 518 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 HIST1H2ACQ93077 130 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 SGTBQ96EQ0 304 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 SLC38A2Q96QD8 506 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 LRRC37BQ96QE4 947 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 ADA2Q9NZK5 511 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 CRNNQ9UBG3 495 aaPredicted RBP11.29□□□□□ -0.6
XRN1-203ENST00000463916 IGLV1-44P01699 117 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 TSPAN19P0C672 248 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 CECR9P0C854 216 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 MSX2P35548 267 aaPredicted RBP11.29□□□□□ -0.6
XRN1-203ENST00000463916 ST3GAL3Q11203 375 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 IFI44LQ53G44 452 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 C1QTNF12Q5T7M4 302 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 FKBP9P1Q75LS8 142 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 NANOGNBQ7Z5D8 188 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 FAM86B1Q8N7N1 296 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 OR6N1Q8NGY5 312 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 LIPHQ8WWY8 451 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 GEMIN6Q8WXD5 167 aaKnown RBP11.29□□□□□ -0.6
XRN1-203ENST00000463916 TMEM54Q969K7 222 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 GTPBP3Q969Y2 492 aaKnown RBP11.29□□□□□ -0.6
XRN1-203ENST00000463916 FAM162AQ96A26 154 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 HS6ST2Q96MM7 605 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 DHRS9Q9BPW9 319 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 GDF2Q9UK05 429 aaPredicted RBP11.29□□□□□ -0.6
XRN1-203ENST00000463916 MED31Q9Y3C7 131 aa11.29□□□□□ -0.6
XRN1-203ENST00000463916 NDUFAB1O14561 156 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 TMCC2O75069 709 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 IGF2P01344 180 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 IGKV3-15P01624 115 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 HLA-HP01893 362 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 TCN1P20061 433 aaPredicted RBP11.28□□□□□ -0.6
XRN1-203ENST00000463916 GLYATQ6IB77 296 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 C11orf71Q6IPW1 123 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 TBPL2Q6SJ96 375 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 ZNF627Q7L945 461 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 OFCC1Q8IZS5 231 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 DEPDC4Q8N2C3 294 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 SLC25A44Q96H78 314 aaPredicted RBP11.28□□□□□ -0.6
XRN1-203ENST00000463916 C18orf12Q96KH6 178 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 CCT8L2Q96SF2 557 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 ULBP2Q9BZM5 246 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 NOX3Q9HBY0 568 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 B3GNT2Q9NY97 397 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 GLTPQ9NZD2 209 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 ZNF224Q9NZL3 707 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 ATP23Q9Y6H3 246 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 IGHV4-39P01824 125 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 PGA4P0DJD7 388 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 PGA3P0DJD8 388 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
XRN1-203ENST00000463916 B4GALT1P15291 398 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 FOSL1P15407 271 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 MAKP20794 623 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 CALCRP30988 508 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 CSNK1A1P48729 337 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 FABP6P51161 128 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 FHL1Q13642 323 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 MDP1Q86V88 176 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 NRMQ8IXM6 262 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 MUC15Q8N387 334 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 FITM2Q8N6M3 262 aa11.28□□□□□ -0.6
XRN1-203ENST00000463916 HTRA1Q92743 480 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms