RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 KCNN2Q9H2S1 579 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 MRPL39Q9NYK5 338 aaKnown RBP11.54□□□□□ -0.56
VAPB-203ENST00000463370 MOKQ9UQ07 419 aa11.54□□□□□ -0.56
VAPB-203ENST00000463370 FUOMA2VDF0 154 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 PRSS37A4D1T9 235 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 ETV2O00321 342 aaPredicted RBP11.53□□□□□ -0.56
VAPB-203ENST00000463370 HPGDSO60760 199 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 RENP00797 406 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 F8A1P23610 371 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 EDNRAP25101 427 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 GBX2P52951 348 aaPredicted RBP11.53□□□□□ -0.56
VAPB-203ENST00000463370 DDI2Q5TDH0 399 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.53□□□□□ -0.56
VAPB-203ENST00000463370 CDC20BQ86Y33 519 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 POC5Q8NA72 575 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 OR2M3Q8NG83 312 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 HTRA1Q92743 480 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 ORAI1Q96D31 301 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 SRRQ9GZT4 340 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 TXNIPQ9H3M7 391 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 TIGARQ9NQ88 270 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 PISDQ9UG56 409 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 MRM2Q9UI43 246 aaKnown RBP11.53□□□□□ -0.56
VAPB-203ENST00000463370 IGLV3-32A0A0A0MS00 114 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 TRBV2A0A0J9YWF9 115 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 A0A1B0GTH9 108 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 G3V3Y1 287 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 XKRYO14609 159 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 OR2T1O43869 369 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 CBFA2T3O75081 653 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 RPP14O95059 124 aaKnown RBP11.53□□□□□ -0.56
VAPB-203ENST00000463370 OR6A2O95222 327 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 CTLA4P16410 223 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 CD53P19397 219 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 FOLR3P41439 243 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 MTNR1BP49286 362 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 DLX5P56178 289 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 ZNF468Q5VIY5 522 aaPredicted RBP11.53□□□□□ -0.56
VAPB-203ENST00000463370 LRRC69Q6ZNQ3 347 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 RAB11FIP2Q7L804 512 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 OR6N2Q8NGY6 317 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 DIRAS2Q96HU8 199 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 UBL7Q96S82 380 aaPredicted RBP11.53□□□□□ -0.56
VAPB-203ENST00000463370 CDCP1Q9H5V8 836 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 UGT2A1Q9Y4X1 527 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 PCDHGA5Q9Y5G8 931 aa11.53□□□□□ -0.56
VAPB-203ENST00000463370 A0A0G2JK05 382 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 SLC16A7O60669 478 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 CCL3P10147 92 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 TFPIP10646 304 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 ZNF41P51814 821 aaPredicted RBP11.52□□□□□ -0.57
VAPB-203ENST00000463370 PUDPQ08623 228 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 FAM131AQ6UXB0 335 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 NAXDQ8IW45 347 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 OR8H2Q8N162 312 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 AP3S1Q92572 193 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 LOXL4Q96JB6 756 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 ADAD1Q96M93 576 aaKnown RBP11.52□□□□□ -0.57
VAPB-203ENST00000463370 OR14A2Q96R54 314 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 TBCCD1Q9NVR7 557 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 MALT1Q9UDY8 824 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 B9D1Q9UPM9 204 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 NSG1A0A0A6YYJ2 146 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 SLC22A23A1A5C7 686 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 UPK3AO75631 287 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 ABHD16AO95870 558 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 IFNGR1P15260 489 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 TCN2P20062 427 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 Q0VFX4 171 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 EXT1Q16394 746 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 MEP1BQ16820 701 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 SLC25A35Q3KQZ1 300 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 IDNKQ5T6J7 187 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 RPL22L1Q6P5R6 122 aaKnown RBP11.52□□□□□ -0.57
VAPB-203ENST00000463370 PPP1R32Q7Z5V6 425 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 MFSD8Q8NHS3 518 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 RGP1Q92546 391 aaPredicted RBP11.52□□□□□ -0.57
VAPB-203ENST00000463370 NXPE2Q96DL1 559 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 TXNDC15Q96J42 360 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 NDEL1Q9GZM8 345 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 PROK2Q9HC23 129 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 B3GAT2Q9NPZ5 323 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 MRPL22Q9NWU5 206 aaKnown RBP11.52□□□□□ -0.57
VAPB-203ENST00000463370 MED29Q9NX70 200 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 VSX1Q9NZR4 365 aaPredicted RBP11.52□□□□□ -0.57
VAPB-203ENST00000463370 KCNG2Q9UJ96 466 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 PADI1Q9ULC6 663 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 TBC1D24Q9ULP9 559 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 TRAPPC4Q9Y296 219 aa11.52□□□□□ -0.57
VAPB-203ENST00000463370 IGLV1-36A0A0B4J1U3 117 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 A0A1W2PNR3 127 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 ISPDA4D126 451 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 LIPT2A6NK58 231 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 C9orf172C9J069 976 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 ZNF208O43345 1280 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 ZFPL1O95159 310 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 MPZL1O95297 269 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 IGHMP01871 453 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 KLK2P20151 261 aa11.51□□□□□ -0.57
VAPB-203ENST00000463370 MSX1P28360 303 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms