RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 DAG1Q14118 895 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 GGTLC2Q14390 218 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 GLIPR1L2Q4G1C9 344 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 CYB5R2Q6BCY4 276 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 DLEU7Q6UYE1 221 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 NANOGNBQ7Z5D8 188 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 MSRB3Q8IXL7 192 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 ZNF525Q8N782 197 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 FAM169BQ8N8A8 192 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 ADAMTS16Q8TE57 1224 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 HTRA1Q92743 480 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 ZNF566Q969W8 418 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 BOD1Q96IK1 185 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 OR2M2Q96R28 347 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 TNFRSF13CQ96RJ3 184 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 EMC6Q9BV81 110 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 PRR14Q9BWN1 585 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 BEX2Q9BXY8 128 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 LRMDAQ9H2I8 198 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 DENND2DQ9H6A0 471 aaPredicted RBP7.73□□□□□ -1.17
LDB1-203ENST00000461873 STX18Q9P2W9 335 aaKnown RBP7.73□□□□□ -1.17
LDB1-203ENST00000461873 GPR160Q9UJ42 338 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 SLC7A7Q9UM01 511 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 AP3M1Q9Y2T2 418 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 SH3GLB1Q9Y371 365 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 CMAHPQ9Y471 501 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 CHST2Q9Y4C5 530 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 GMEB1Q9Y692 573 aa7.73□□□□□ -1.17
LDB1-203ENST00000461873 IGHV4-30-2A0A087WSY4 118 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 LOC390937A0A1W2PQ73 354 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 SH3PXD2BA1X283 911 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 MS4A18H0YCH9 400 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 BLOC1S5-TXNDC5H3BN57 136 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 hCG_2039718K7EN88 272 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 MRASO14807 208 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 GSTA4O15217 222 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 CRLF1O75462 422 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 GMNNO75496 209 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 ZNF432O94892 652 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 BCL10O95999 233 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 NR2C1P13056 603 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 PCGF2P35227 344 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 GZMKP49863 264 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 P2RY4P51582 365 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 BIDP55957 195 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 LSM11P83369 360 aaKnown RBP eCLIP7.72□□□□□ -1.17
LDB1-203ENST00000461873 SLC25A3Q00325 362 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 PLP2Q04941 152 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 PIGFQ07326 219 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 TAF11Q15544 211 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 DUSP7Q16829 419 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 VMACQ2NL98 169 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 MS4A18Q3C1V0 323 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 REP15Q6BDI9 236 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 C11orf71Q6IPW1 123 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 TMEM53Q6P2H8 277 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 UNQ6126/PRO20091Q6UXV3 157 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 B3GLCTQ6Y288 498 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 DEF8Q6ZN54 512 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 SLC35D2Q76EJ3 337 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 ZNF771Q7L3S4 317 aaPredicted RBP7.72□□□□□ -1.17
LDB1-203ENST00000461873 RRM2BQ7LG56 351 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 MDP1Q86V88 176 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 C20orf196Q8IYI0 205 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 CDK20Q8IZL9 346 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 NUP37Q8NFH4 326 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 OR8J3Q8NGG0 315 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 OR6T1Q8NGN1 323 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 NEU4Q8WWR8 484 aaPredicted RBP7.72□□□□□ -1.17
LDB1-203ENST00000461873 LRRC58Q96CX6 371 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 TPD52L3Q96J77 140 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 FOXB1Q99853 325 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 SLC19A3Q9BZV2 496 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 NDEL1Q9GZM8 345 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 SHARPINQ9H0F6 387 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 IKZF5Q9H5V7 419 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 KAT8Q9H7Z6 458 aaKnown RBP7.72□□□□□ -1.17
LDB1-203ENST00000461873 MED29Q9NX70 200 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 ARMCX1Q9P291 453 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 LPAR3Q9UBY5 353 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 SEC14L4Q9UDX3 406 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 ZNF229Q9UJW7 825 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 CDC42EP3Q9UKI2 254 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 KCNS2Q9ULS6 477 aa7.72□□□□□ -1.17
LDB1-203ENST00000461873 CHD3Q12873 2000 aaKnown RBP7.72□□□□□ -1.17
LDB1-203ENST00000461873 IGKV1D-42A0A075B6H8 117 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 TRBV5-3A0A0A0MS03 114 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 LOC100653049A0A140TA62 436 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 IQCMA0A1B0GVH7 501 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 SLC22A23A1A5C7 686 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 PLPP3O14495 311 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 TPST2O60704 377 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 KRT34O76011 436 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 SEC14L2O76054 403 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 IGKV3-15P01624 115 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 IGHG1P01857 330 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 BGLAPP02818 100 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 MT-ND5P03915 603 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 OR8G3PP0DMU2 310 aa7.71□□□□□ -1.18
LDB1-203ENST00000461873 APEHP13798 732 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms