RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 DUXAA6NLW8 204 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM114B3SHH9 223 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CLDN25C9JDP6 229 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SCAMP2O15127 329 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 PLPP2O43688 288 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 TBX19O60806 448 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 UGT2B17O75795 530 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SEC14L2O76054 403 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 AKR7A3O95154 331 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 C6orf47O95873 294 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 IGKV3-15P01624 115 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 IGLV1-44P01699 117 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CHRM4P08173 479 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SNRPAP09012 282 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SBK3P0C264 359 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 UROSP10746 265 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 MYL2P10916 166 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CD79AP11912 226 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 BCKDHAP12694 445 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CBR1P16152 277 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CXCR1P25024 350 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 COL8A2P25067 703 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 GTF2E2P29084 291 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 PCGF2P35227 344 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 ARR3P36575 388 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 IDH2P48735 452 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 POLR2HP52434 150 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SELENOVP59797 346 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 LMO4P61968 165 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SUMO1P63165 101 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 H3F3AP84243 136 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 POU3F1Q03052 451 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 PDE7AQ13946 482 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CEACAM7Q14002 265 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 MAD2L1BPQ15013 274 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF141Q15928 474 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 ALKBH6Q3KRA9 238 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 PRAMEF8Q5VWM4 474 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 PRAMEF7Q5VXH5 474 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 LIPMQ5VYY2 423 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CLEC6AQ6EIG7 209 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM154Q6P9G4 183 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 EMBQ6PCB8 327 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 ZDHHC24Q6UX98 284 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 MYPOPQ86VE0 399 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 LCA5Q86VQ0 697 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 DDIASQ8IXT1 998 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 GPR137CQ8N3F9 429 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM99Q8N816 258 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CCDC63Q8NA47 563 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SPATA4Q8NEY3 305 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SFXN5Q8TD22 340 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 MAGEE2Q8TD90 523 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 ST7LQ8TDW4 575 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 OR5P2Q8WZ92 322 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 BCL2L2Q92843 193 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 YIPF5Q969M3 257 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SLC35G5Q96KT7 338 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 PRPF18Q99633 342 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 GAL3ST1Q99999 423 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SF3B5Q9BWJ5 86 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 C1QTNF5Q9BXJ0 243 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 MRPL37Q9BZE1 423 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SLITRK2Q9H156 845 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 MMP27Q9H306 513 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 SERHL2Q9H4I8 314 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 GSTO2Q9H4Y5 243 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 UBAP1Q9NZ09 502 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 NINJ2Q9NZG7 142 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 ARMCX1Q9P291 453 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 CRNNQ9UBG3 495 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 BAIAP2L1Q9UHR4 511 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF346Q9UL40 294 aaKnown RBP4.3□□□□□ -1.72
BRCA1-206ENST00000461574 FZR1Q9UM11 496 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 TMED5Q9Y3A6 229 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 WDR45Q9Y484 360 aa4.3□□□□□ -1.72
BRCA1-206ENST00000461574 RNF103-CHMP3A0A140T963 221 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 EXOC1LA0A1B0GW35 172 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM72A0PK05 275 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 AQP7P3A6NL99 342 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF561-AS1K7EIQ3 104 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 TIMM23O14925 209 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF208O43345 1280 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 FCMRO60667 390 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 UPK3AO75631 287 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF432O94892 652 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 RAB36O95755 333 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 AGR2O95994 175 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 MT-ND5P03915 603 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 CRYBA1P05813 215 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 IGFBP1P08833 259 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-206ENST00000461574 LINC00032P0C843 101 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 LAMP1P11279 417 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 MDKP21741 143 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-206ENST00000461574 MATN1P21941 496 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 NR4A1P22736 598 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 OMGP23515 440 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 PRPH2P23942 346 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 TACR3P29371 465 aa4.29□□□□□ -1.72
BRCA1-206ENST00000461574 GCH1P30793 250 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms