RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ANXA8P13928 327 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 FUT3P21217 361 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 HTR1EP28566 365 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 SUB1P53999 127 aaKnown RBP eCLIP2.26□□□□□ -2.05
VCL-203ENST00000461383 SH3BGRP55822 239 aaPredicted RBP2.26□□□□□ -2.05
VCL-203ENST00000461383 LYZP61626 148 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 RPS15P62841 145 aaKnown RBP2.26□□□□□ -2.05
VCL-203ENST00000461383 ZNF763Q0D2J5 394 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 MERTKQ12866 999 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 IL18Q14116 193 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ZNF79Q15937 498 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 RNF212Q495C1 297 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ANXA8L1Q5VT79 327 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 C9orf135Q5VTT2 229 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 C6orf89Q6UWU4 347 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ZNF836Q6ZNA1 936 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 SLC25A48Q6ZT89 311 aaKnown RBP2.26□□□□□ -2.05
VCL-203ENST00000461383 BZW1Q7L1Q6 419 aaKnown RBP2.26□□□□□ -2.05
VCL-203ENST00000461383 NIPA1Q7RTP0 329 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ASCL5Q7RTU5 278 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 PEX26Q7Z412 305 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 LHFPL3Q86UP9 236 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 PIANPQ8IYJ0 282 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 TMEM61Q8N0U2 210 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ZNF557Q8N988 423 aaPredicted RBP2.26□□□□□ -2.05
VCL-203ENST00000461383 DCAF4L2Q8NA75 395 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 OR4C5Q8NGB2 326 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 OR1N2Q8NGR9 330 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 KIFAP3Q92845 792 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 FCRL1Q96LA6 429 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 PANX1Q96RD7 426 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ATP5SQ99766 215 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ECSITQ9BQ95 431 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 C11orf70Q9BRQ4 267 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 TMEM246Q9BRR3 403 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 MTG1Q9BT17 334 aaPredicted RBP2.26□□□□□ -2.05
VCL-203ENST00000461383 FAIM2Q9BWQ8 316 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 SRMSQ9H3Y6 488 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 CLMPQ9H6B4 373 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 EXO5Q9H790 373 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ANKRA2Q9H9E1 313 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 PLSCR3Q9NRY6 295 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 ADAM22Q9P0K1 906 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 GCNT4Q9P109 453 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 KIAA1257Q9ULG3 409 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 MSH6P52701 1360 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 KIR2DL5BA0A0G2JN68 375 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 KIR2DL5BA0A0G2JPC4 375 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 USP27XA6NNY8 438 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 CDC7O00311 574 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 DNALI1O14645 258 aaPredicted RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 EEDO75530 441 aaKnown RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 CLIC3O95833 236 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 IGLV1-47P01700 117 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 KRT6AP02538 564 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 CSF3P09919 207 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 GKN3PP0CG01 181 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 CHTF8P0CG12 524 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 SFTPCP11686 197 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 GTF2E2P29084 291 aaKnown RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 NAA10P41227 235 aaPredicted RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 GPR6P46095 362 aaPredicted RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 CCNHP51946 323 aaPredicted RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 NDPQ00604 133 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 GBE1Q04446 702 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 WDR43Q15061 677 aaKnown RBP eCLIP2.25□□□□□ -2.05
VCL-203ENST00000461383 CHRNA6Q15825 494 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 ZBED5Q49AG3 693 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 LRRC10Q5BKY1 277 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 OTPQ5XKR4 325 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 LCN12Q6JVE5 192 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 ANKRD26P1Q6NSI1 321 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 SASS6Q6UVJ0 657 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 SLC16A14Q7RTX9 510 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 THOC6Q86W42 341 aaKnown RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 RALGPS2Q86X27 583 aaPredicted RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 MFSD6LQ8IWD5 586 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 KIR2DL5AQ8N109 375 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 PDIK1LQ8N165 341 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 FBXL16Q8N461 479 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 MS4A15Q8N5U1 240 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 C20orf203Q8NBC4 194 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 KIR2DL5BQ8NHK3 375 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 SLC7A13Q8TCU3 470 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 STARD8Q92502 1023 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 NDRG1Q92597 394 aaKnown RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 FGF14Q92915 247 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 SGK3Q96BR1 496 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 ZIM3Q96PE6 472 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 GSDMAQ96QA5 445 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 PLEKHF1Q96S99 279 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 SLC29A1Q99808 456 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 NRIP2Q9BQI9 281 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 OR11A1Q9GZK7 315 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 PDFQ9HBH1 243 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 UXTQ9UBK9 157 aaPredicted RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 NUFIP1Q9UHK0 495 aaKnown RBP2.25□□□□□ -2.05
VCL-203ENST00000461383 GNPTGQ9UJJ9 305 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 LSM7Q9UK45 103 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms