RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 PHF3Q92576 2039 aaKnown RBP2.69□□□□□ -1.98
CLK1-206ENST00000461326 PLA2R1Q13018 1463 aa2.69□□□□□ -1.98
CLK1-206ENST00000461326 NEURL4Q96JN8 1562 aa2.69□□□□□ -1.98
CLK1-206ENST00000461326 KDM5AP29375 1690 aaKnown RBP2.69□□□□□ -1.98
CLK1-206ENST00000461326 NOS1P29475 1434 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 TMEM131LA2VDJ0 1609 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 IGKV1D-8A0A087WSZ0 117 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 A0A0J9YXY3 114 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 CTAGE15A4D2H0 777 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 A6NIZ1 184 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 EMC8O43402 210 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 MBTPS2O43462 519 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 SOX15O60248 233 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 UPK3AO75631 287 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 TMEM50AO95807 157 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 IGLV1-47P01700 117 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 KRT14P02533 472 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 MMP1P03956 469 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 C2P06681 752 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 TNNI1P19237 187 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 CXCR2P25025 360 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 CASP14P31944 242 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 TNNT2P45379 298 aaPredicted RBP2.68□□□□□ -1.98
CLK1-206ENST00000461326 TPMTP51580 245 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 PLP1P60201 277 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 RAP1BP61224 184 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 KCNJ2P63252 427 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 ZNF763Q0D2J5 394 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 ARHGAP19Q14CB8 494 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 CYTH1Q15438 398 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 TMEM107Q6UX40 140 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 TMIGD1Q6UXZ0 262 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 RNF165Q6ZSG1 346 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 SLC25A48Q6ZT89 311 aaKnown RBP2.68□□□□□ -1.98
CLK1-206ENST00000461326 PEX26Q7Z412 305 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 ZNF546Q86UE3 836 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 CTAGE6Q86UF2 777 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 CEND1Q8N111 149 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 OR6C4Q8NGE1 309 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 RNF139Q8WU17 664 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 ACOT11Q8WXI4 607 aaPredicted RBP2.68□□□□□ -1.98
CLK1-206ENST00000461326 FRAT1Q92837 279 aaPredicted RBP2.68□□□□□ -1.98
CLK1-206ENST00000461326 FGF11Q92914 225 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 PHYHIPLQ96FC7 376 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 SLC35E1Q96K37 410 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 NRIP2Q9BQI9 281 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 KLHL28Q9NXS3 571 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 PSMC3IPQ9P2W1 217 aaPredicted RBP2.68□□□□□ -1.98
CLK1-206ENST00000461326 TRAF3IP3Q9Y228 551 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 NEUROG3Q9Y4Z2 214 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 SCAF11Q99590 1463 aaKnown RBP2.68□□□□□ -1.98
CLK1-206ENST00000461326 ARHGAP23Q9P227 1491 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 CHD4Q14839 1912 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 SLIT1O75093 1534 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 TRPM2O94759 1503 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 PTPRTO14522 1441 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 NPHP4O75161 1426 aaPredicted RBP2.68□□□□□ -1.98
CLK1-206ENST00000461326 RIMS2Q9UQ26 1411 aa2.68□□□□□ -1.98
CLK1-206ENST00000461326 STRCP1A6NGW2 1772 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 PPLO60437 1756 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 TMEM2Q9UHN6 1383 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 A0A1W2PPV9 198 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 HEATR9A2RTY3 570 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 PSMB11A5LHX3 300 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 GOLGA8OA6NCC3 632 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 TRIM49D1C9J1S8 452 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 E9PBE3 544 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 GOLGA8NF8WBI6 632 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 FOXE1O00358 373 aaPredicted RBP2.67□□□□□ -1.98
CLK1-206ENST00000461326 PSTPIP1O43586 416 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 MGRN1O60291 552 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 OR7A10O76100 309 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 AGTP01019 485 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 TCN1P20061 433 aaPredicted RBP2.67□□□□□ -1.98
CLK1-206ENST00000461326 CD1BP29016 333 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 GDI1P31150 447 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 APOC4P55056 127 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 GK3PQ14409 553 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 ZNF79Q15937 498 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 RNF212Q495C1 297 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 ARMC12Q5T9G4 340 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 ZNF544Q6NX49 715 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 ERI1Q8IV48 349 aaKnown RBP2.67□□□□□ -1.98
CLK1-206ENST00000461326 C6orf223Q8N319 242 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 RAB3IL1Q8TBN0 382 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 GPR151Q8TDV0 419 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 PIBF1Q8WXW3 757 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 CMTM7Q96FZ5 175 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 PANX2Q96RD6 677 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 FMO2Q99518 471 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 SH3GL1Q99961 368 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 TMEM246Q9BRR3 403 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 RIOK2Q9BVS4 552 aaKnown RBP2.67□□□□□ -1.98
CLK1-206ENST00000461326 ACTR6Q9GZN1 396 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 ROGDIQ9GZN7 287 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 ZFP14Q9HCL3 533 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 EXD2Q9NVH0 621 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 RLFQ13129 1914 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 CCDC144AA2RUR9 1427 aa2.67□□□□□ -1.98
CLK1-206ENST00000461326 MED14O60244 1454 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms