RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CPAMD8Q8IZJ3 1885 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 A0A087WUJ7 227 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 IGLV3-32A0A0A0MS00 114 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 TMED7-TICAM2A0A0A6YYA0 188 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 H3BML4 177 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 FAAHO00519 579 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 TRAPPC6AO75865 159 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 DHFRP00374 187 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ITGB2P05107 769 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 FAM87AP0C7U9 286 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 IFI30P13284 250 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 HOXB6P17509 224 aaKnown RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 SLC6A8P48029 635 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 RAD23AP54725 363 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ARF1P84077 181 aaKnown RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 ALDH6A1Q02252 535 aaKnown RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 LTBQ06643 244 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 CRYZQ08257 329 aaKnown RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 ZNF766Q5HY98 468 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 MBOAT2Q6ZWT7 520 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 RIMS4Q9H426 269 aaPredicted RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 RIBC2Q9H4K1 309 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 EGLN3Q9H6Z9 239 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ZNF71Q9NQZ8 489 aaPredicted RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 TMED7Q9Y3B3 224 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 A0A1W2PN81 502 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 M0R129 80 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 SUSD5O60279 629 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 CH25HO95992 272 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 HK1P19367 917 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 CXCR1P25024 350 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 GDF1P27539 372 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 POU1F1P28069 291 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 CHRNA7P36544 502 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 MAGEA5P43359 124 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 RPS5P46782 204 aaKnown RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 MEOX1P50221 254 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ZNF41P51814 821 aaPredicted RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 SMIM11AP58511 58 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ZSWIM7Q19AV6 140 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 NHSL2Q5HYW2 709 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 WIPI1Q5MNZ9 446 aaPredicted RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 C3orf33Q6P1S2 294 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 TMEM81Q6P7N7 255 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 SLC22A25Q6T423 547 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ETV3LQ6ZN32 361 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 RRM2BQ7LG56 351 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 KIF18BQ86Y91 864 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 DND1Q8IYX4 353 aaKnown RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 DNAJA4Q8WW22 397 aaPredicted RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 CYGBQ8WWM9 190 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 OIT3Q8WWZ8 545 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 UBE2FQ969M7 185 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 TMEM41AQ96HV5 264 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ZNF597Q96LX8 424 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ZNF184Q99676 751 aaPredicted RBP9.29□□□□□ -0.92
USP39-210ENST00000459775 KCNS3Q9BQ31 491 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 ZNF426Q9BUY5 554 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 TTTY12Q9BZ98 90 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 PLA2G12AQ9BZM1 189 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 GABARAPL1Q9H0R8 117 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 MARCH7Q9H992 704 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 MAST4O15021 2626 aa9.29□□□□□ -0.92
USP39-210ENST00000459775 NCKAP5O14513 1909 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 ZNF462Q96JM2 2506 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 TRAV27A0A087WT01 109 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 C5orf51A6NDU8 294 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 NME2P1O60361 137 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 GPX5O75715 221 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 RAB3DO95716 219 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 TP53P04637 393 aaPredicted RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 THRBP10828 461 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 KLK2P20151 261 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 NME2P22392 152 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 SFTPDP35247 375 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 KIR3DL2P43630 455 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 NKX2-5P52952 324 aaPredicted RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 RAET1LQ5VY80 246 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 TTC33Q6PID6 262 aaPredicted RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 IGFL2Q6UWQ7 119 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 ZNF813Q6ZN06 617 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 FAM122BQ7Z309 247 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 GRINAQ7Z429 371 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 THAP5Q7Z6K1 395 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 CPOQ8IVL8 374 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 GPALPP1Q8IXQ4 340 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 IQCF1Q8N6M8 205 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 OR51A7Q8NH64 312 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 DNAJC9Q8WXX5 260 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 SMPDL3BQ92485 455 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 MYDGFQ969H8 173 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 TAAR8Q969N4 342 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 BPIFA2Q96DR5 249 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 C5orf34Q96MH7 638 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 FAM173AQ9BQD7 235 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 ZFP64Q9NPA5 681 aa9.28□□□□□ -0.92
USP39-210ENST00000459775 SMPD3Q9NY59 655 aaPredicted RBP9.28□□□□□ -0.92
USP39-210ENST00000459775 DKKL1Q9UK85 242 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms