RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 LIPT2A6NK58 231 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 FTCDNL1E5RQL4 147 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 LRRN3E7EW58 273 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 NPIPA5E9PKD4 350 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 H3BML4 177 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 KLRC4-KLRK1H3BQV0 150 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 M0R082 166 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 PLPP3O14495 311 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 EIF1BO60739 113 aaKnown RBP8.04□□□□□ -1.12
VPS50-207ENST00000458530 PMS2P2O95744 297 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 NR2C1P13056 603 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 HIST1H1CP16403 213 aaKnown RBP8.04□□□□□ -1.12
VPS50-207ENST00000458530 AHCYP23526 432 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 C21orf33P30042 268 aaPredicted RBP8.04□□□□□ -1.12
VPS50-207ENST00000458530 MAP2K4P45985 399 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 SLC25A1P53007 311 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 SLC16A1P53985 500 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 RPL27P61353 136 aaKnown RBP8.04□□□□□ -1.12
VPS50-207ENST00000458530 ERVK-25P63136 954 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 LTBQ06643 244 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 PIGFQ07326 219 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 CDC20Q12834 499 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 MFAP5Q13361 173 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 PON3Q15166 354 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 TOMM20Q15388 145 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 OR1C1Q15619 314 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 TIGD6Q17RP2 521 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 KLHL12Q53G59 568 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 PDSS1Q5T2R2 415 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 TUBA3EQ6PEY2 450 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 DNM1P34Q6PK57 102 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 B3GNT6Q6ZMB0 384 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 TMPRSS11AQ6ZMR5 421 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 MDGA2Q7Z553 956 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 IGFN1Q86VF2 1251 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 AMER2Q8N7J2 671 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 LRRC75AQ8NAA5 344 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 TMEM178AQ8NBL3 297 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 SDR9C7Q8NEX9 313 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 OR2T4Q8NH00 348 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 OR4K13Q8NH42 304 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 OR14L1PQ8NHC6 308 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 MOSPD2Q8NHP6 518 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 ZNF417Q8TAU3 575 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 SGCDQ92629 289 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 ISOC1Q96CN7 298 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 LGALS12Q96DT0 336 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 ZNF587Q96SQ5 575 aaPredicted RBP8.04□□□□□ -1.12
VPS50-207ENST00000458530 KLHDC3Q9BQ90 382 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 RHNO1Q9BSD3 238 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 OR11A1Q9GZK7 315 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 TXNIPQ9H3M7 391 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 PTTG2Q9NZH5 202 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 NPIPA1Q9UND3 350 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 EXOGQ9Y2C4 368 aaKnown RBP8.04□□□□□ -1.12
VPS50-207ENST00000458530 CEPT1Q9Y6K0 416 aa8.04□□□□□ -1.12
VPS50-207ENST00000458530 NCKAP5O14513 1909 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 HIVEP3Q5T1R4 2406 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 OTOGQ6ZRI0 2925 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 FAM183AA6NL82 134 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 C11orf98E9PRG8 122 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 ACOT7O00154 380 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 AHCYL1O43865 530 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 SERPINI2O75830 405 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 SLC2A10O95528 541 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 IGHA1P01876 353 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 F13BP05160 661 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 PRKAR1AP10644 381 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 GDF1P27539 372 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 CD96P40200 585 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 DNASE1L1P49184 302 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 GP2P55259 537 aaKnown RBP8.03□□□□□ -1.12
VPS50-207ENST00000458530 WNT4P56705 351 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 OR2B6P58173 313 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 RAC1P63000 192 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 ARG2P78540 354 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 HSF2Q03933 536 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 MYBPHQ13203 477 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 GGTLC2Q14390 218 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 MED22Q15528 200 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 ZNF468Q5VIY5 522 aaPredicted RBP8.03□□□□□ -1.12
VPS50-207ENST00000458530 GPR107Q5VW38 600 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 FOXB2Q5VYV0 432 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 LEG1Q6P5S2 330 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 FAM122BQ7Z309 247 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 PXKQ7Z7A4 578 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 P2RY8Q86VZ1 359 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 ANKRD13BQ86YJ7 626 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 KLHL36Q8N4N3 616 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 ACBD7Q8N6N7 88 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 ARIH2OSQ8N7S6 290 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 NPEPL1Q8NDH3 523 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 ATP6V1C2Q8NEY4 427 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 OR2M7Q8NG81 312 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 OR52N1Q8NH53 320 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 POC1BQ8TC44 478 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 FNDC8Q8TC99 324 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 TMIGD2Q96BF3 282 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 ZNF524Q96C55 264 aa8.03□□□□□ -1.12
VPS50-207ENST00000458530 RASD2Q96D21 266 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms