RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 KIF18BQ86Y91 864 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 C20orf196Q8IYI0 205 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 TMEM123Q8N131 208 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 GABRG1Q8N1C3 465 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 ARIH2OSQ8N7S6 290 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 OR52L1Q8NGH7 329 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 ZNF566Q969W8 418 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 GTPBP3Q969Y2 492 aaKnown RBP12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 TXNDC15Q96J42 360 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 OR2M2Q96R28 347 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 RBM24Q9BX46 236 aaKnown RBP12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 POLDIP3Q9BY77 421 aaKnown RBP12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 OPN3Q9H1Y3 402 aaPredicted RBP12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 OR52D1Q9H346 318 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 B3GAT2Q9NPZ5 323 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 KIF17Q9P2E2 1029 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 BAIAP2Q9UQB8 552 aa12.65□□□□□ -0.38
HMGXB4-204ENST00000455359 FAM90A27PA6NNH2 459 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 RPL36A-HNRNPH2H7BZ11 118 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 IGHG1P01857 330 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 POU2F1P14859 743 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF26P17031 533 aaPredicted RBP12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 PSMB1P20618 241 aaKnown RBP12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 CD79BP40259 229 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 SELENOPP49908 381 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 BIDP55957 195 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 TGFBR3Q03167 851 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 TFF3Q07654 80 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 SSX8Q7RTT4 187 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 ASB10Q8WXI3 467 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 NIPSNAP1Q9BPW8 284 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 RBM4BQ9BQ04 359 aaKnown RBP12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 ALG12Q9BV10 488 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 RBM4Q9BWF3 364 aaKnown RBP12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 SEMA6AQ9H2E6 1030 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 DCLRE1BQ9H816 532 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 ASB6Q9NWX5 421 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 MED29Q9NX70 200 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 GRHPRQ9UBQ7 328 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 UPB1Q9UBR1 384 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 OAZ3Q9UMX2 235 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 POFUT2Q9Y2G5 429 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 GPR52Q9Y2T5 361 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 NCOA6Q14686 2063 aaPredicted RBP12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
HMGXB4-204ENST00000455359 PDLIM1O00151 329 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 SERPINI2O75830 405 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 KRT33AO76009 404 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 BAG2O95816 211 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 OSMP13725 252 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 COX5AP20674 150 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 PRKACGP22612 351 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 MPGP29372 298 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 SDHAP31040 664 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 CSNK1A1P48729 337 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 FXYD6P3P58550 94 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 ITGADQ13349 1161 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 CDSNQ15517 529 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 HIST3H3Q16695 136 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 TSPO2Q5TGU0 170 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 KLHL17Q6TDP4 642 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 THSD4Q6ZMP0 1018 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 FAM122BQ7Z309 247 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 LUZP2Q86TE4 346 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 ADCK1Q86TW2 530 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 HS3ST5Q8IZT8 346 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 UBE2J2Q8N2K1 259 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 GPR137CQ8N3F9 429 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 ICA1LQ8NDH6 482 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 OR6N1Q8NGY5 312 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF519Q8TB69 540 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 BOD1Q96IK1 185 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 SAMD8Q96LT4 415 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 C9orf16Q9BUW7 83 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 KATNB1Q9BVA0 655 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 IFT27Q9BW83 186 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 MRPL13Q9BYD1 178 aaKnown RBP12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 SLC24A3Q9HC58 644 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 C8orf4Q9NR00 106 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 PAPOLBQ9NRJ5 636 aaKnown RBP12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 SLC7A10Q9NS82 523 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 GALNT8Q9NY28 637 aa12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 ANKHD1Q8IWZ3 2542 aaKnown RBP12.63□□□□□ -0.39
HMGXB4-204ENST00000455359 NKX2-6A6NCS4 301 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ZNF587BE7ETH6 402 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 H0YHG0 523 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 C16orf97H3BN30 126 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 XKRYO14609 159 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 RNF224P0DH78 156 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 PGA4P0DJD7 388 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 PGA3P0DJD8 388 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ACADSP16219 412 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 PPP3CBP16298 524 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ACVR1BP36896 505 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 SH3BGRP55822 239 aaPredicted RBP12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 ERVK-25P63136 954 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 PPP2R2BQ00005 443 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 SFRP5Q5T4F7 317 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 KDM4DQ6B0I6 523 aa12.62□□□□□ -0.39
HMGXB4-204ENST00000455359 LNX2Q8N448 690 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms