RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ATP4BP51164 291 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 SEC24CP53992 1094 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 DAG1Q14118 895 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 FXNQ16595 210 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 ELFN2Q5R3F8 820 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 C5orf46Q6UWT4 87 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 ZNF786Q8N393 782 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 LRRC17Q8N6Y2 441 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 SCAIQ8N9R8 606 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 CKAP2Q8WWK9 683 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 TMEM54Q969K7 222 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 THOC1Q96FV9 657 aaKnown RBP13.81□□□□□ -0.2
GPC1-206ENST00000455111 C1orf159Q96HA4 380 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 LRR1Q96L50 414 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 KCNS3Q9BQ31 491 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 TMEM43Q9BTV4 400 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 MYOZ1Q9NP98 299 aaPredicted RBP13.81□□□□□ -0.2
GPC1-206ENST00000455111 TAS2R5Q9NYW4 299 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 LPAR3Q9UBY5 353 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 KCNS2Q9ULS6 477 aa13.81□□□□□ -0.2
GPC1-206ENST00000455111 WNT9BO14905 357 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 TGFAP01135 160 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 ADRA2AP08913 450 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 THBS2P35442 1172 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 MTPNP58546 118 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 STX1BP61266 288 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 PUDPQ08623 228 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 CR1LQ2VPA4 569 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 LRFN4Q6PJG9 635 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 ZNF813Q6ZN06 617 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 ARMC8Q8IUR7 673 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 SKA3Q8IX90 412 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 PAQR4Q8N4S7 273 aaPredicted RBP13.8□□□□□ -0.2
GPC1-206ENST00000455111 HIPK4Q8NE63 616 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 MRPL24Q96A35 216 aaKnown RBP13.8□□□□□ -0.2
GPC1-206ENST00000455111 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 MCHR1Q99705 422 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 PRSS27Q9BQR3 290 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 C19orf24Q9BVV8 132 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 USP22Q9UPT9 525 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 CORINQ9Y5Q5 1042 aa13.8□□□□□ -0.2
GPC1-206ENST00000455111 SERPINI2O75830 405 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 NCR1O76036 304 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 HPXP02790 462 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 CD79AP11912 226 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 NQO1P15559 274 aaKnown RBP13.79□□□□□ -0.2
GPC1-206ENST00000455111 SRD5A1P18405 259 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 SLC6A2P23975 617 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 COL8A2P25067 703 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 CAPZA2P47755 286 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 BIDP55957 195 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 PMS2P3Q13401 168 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 SQLEQ14534 574 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 MAD2L1BPQ15013 274 aaPredicted RBP13.79□□□□□ -0.2
GPC1-206ENST00000455111 GSG1Q2KHT4 349 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 IQCCQ4KMZ1 466 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 ENTPD8Q5MY95 495 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 PXKQ7Z7A4 578 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 LRRC8CQ8TDW0 803 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 NEU4Q8WWR8 484 aaPredicted RBP13.79□□□□□ -0.2
GPC1-206ENST00000455111 YIPF5Q969M3 257 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 TAMM41Q96BW9 452 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 SNX18Q96RF0 628 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 FOXB1Q99853 325 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 ZNF426Q9BUY5 554 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 SPATA5L1Q9BVQ7 753 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 RAB1BQ9H0U4 201 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 CACYBPQ9HB71 228 aaKnown RBP13.79□□□□□ -0.2
GPC1-206ENST00000455111 TMEM27Q9HBJ8 222 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.79□□□□□ -0.2
GPC1-206ENST00000455111 FZR1Q9UM11 496 aa13.79□□□□□ -0.2
GPC1-206ENST00000455111 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
GPC1-206ENST00000455111 C11orf98E9PRG8 122 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 M0QX08 132 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 IFNGR1P15260 489 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 TCN1P20061 433 aaPredicted RBP13.78□□□□□ -0.2
GPC1-206ENST00000455111 FUT4P22083 530 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 PPIBP23284 216 aaKnown RBP13.78□□□□□ -0.2
GPC1-206ENST00000455111 GIPRP48546 466 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 PTDSS1P48651 473 aaKnown RBP13.78□□□□□ -0.2
GPC1-206ENST00000455111 RUNX1T1Q06455 604 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 MELKQ14680 651 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 RAB39AQ14964 217 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 ZNF74Q16587 644 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 TMEM255AQ5JRV8 349 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 DHDDSQ86SQ9 333 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 KRT73Q86Y46 540 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 DPP10Q8N608 796 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 OR5J2Q8NH18 312 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 RNF217Q8TC41 542 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 UBASH3BQ8TF42 649 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 SYT3Q9BQG1 590 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 ASPNQ9BXN1 380 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 ULBP2Q9BZM5 246 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 MEPEQ9NQ76 525 aaPredicted RBP13.78□□□□□ -0.2
GPC1-206ENST00000455111 NOX1Q9Y5S8 564 aa13.78□□□□□ -0.2
GPC1-206ENST00000455111 PRORSD1PA6NEY8 169 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 FBP2O00757 339 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 CHP2O43745 196 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms