RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 NXT1Q9UKK6 140 aaKnown RBP12.34□□□□□ -0.43
CLK3-203ENST00000454830 FAM186AA6NE01 2351 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 NSG1A0A0A6YYJ2 146 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 ANKRD61A6NGH8 418 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 TP53I11O14683 189 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 RAB3BP20337 219 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 TRAM1Q15629 374 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 LIPNQ5VXI9 398 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 OR5B2Q96R09 309 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 GPX7Q96SL4 187 aaPredicted RBP12.34□□□□□ -0.43
CLK3-203ENST00000454830 ATF6BQ99941 703 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 SERINC1Q9NRX5 453 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 MED29Q9NX70 200 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 KLHDC2Q9Y2U9 406 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 V9GYH0 126 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 FREM3P0C091 2139 aa12.34□□□□□ -0.43
CLK3-203ENST00000454830 A0A1W2PNR3 127 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 ANKUB1A6NFN9 424 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 ARL6IP5O75915 188 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 FOXK1P85037 733 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 ANGPT1Q15389 498 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 MEP1BQ16820 701 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 HSD17B12Q53GQ0 312 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 RPL22L1Q6P5R6 122 aaKnown RBP12.33□□□□□ -0.43
CLK3-203ENST00000454830 SLC16A9Q7RTY1 509 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 DDIT4LQ96D03 193 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 SMIM19Q96E16 107 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 SPACA9Q96E40 222 aaPredicted RBP12.33□□□□□ -0.43
CLK3-203ENST00000454830 KLHL15Q96M94 604 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 CDCP1Q9H5V8 836 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 C12orf10Q9HB07 376 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 BRD7Q9NPI1 651 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 ENAMQ9NRM1 1142 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 MOKQ9UQ07 419 aa12.33□□□□□ -0.43
CLK3-203ENST00000454830 A0A0B4J203 849 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 FLRT2O43155 660 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 IFNGR1P15260 489 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 TCN2P20062 427 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 EIF1AXP47813 144 aaKnown RBP12.33□□□□□ -0.44
CLK3-203ENST00000454830 MTNR1BP49286 362 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 ADAM8P78325 824 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 ZNF79Q15937 498 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 DCAF12Q5T6F0 453 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 LINC01590Q5TEZ4 76 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 Q8N402 240 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 LRRC75AQ8NAA5 344 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 PTGES2Q9H7Z7 377 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 KCNG2Q9UJ96 466 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 DMDP11532 3685 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 ZNF593O00488 134 aaPredicted RBP12.33□□□□□ -0.44
CLK3-203ENST00000454830 APEHP13798 732 aaKnown RBP12.33□□□□□ -0.44
CLK3-203ENST00000454830 ETV6P41212 452 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 PUDPQ08623 228 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 P2RY14Q15391 338 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 SLC25A35Q3KQZ1 300 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 DMKNQ6E0U4 476 aaPredicted RBP12.33□□□□□ -0.44
CLK3-203ENST00000454830 LRRN1Q6UXK5 716 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 NRARPQ7Z6K4 114 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 CADM3Q8N126 398 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 SYS1Q8N2H4 156 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 PTDSS2Q9BVG9 487 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
CLK3-203ENST00000454830 EIF1AYO14602 144 aaKnown RBP12.32□□□□□ -0.44
CLK3-203ENST00000454830 F10P00742 488 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 SP9P0CG40 484 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 OR2B6P58173 313 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 CD300CQ08708 224 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 SNTA1Q13424 505 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 CDONQ4KMG0 1287 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 MRPL14Q6P1L8 145 aaKnown RBP12.32□□□□□ -0.44
CLK3-203ENST00000454830 SFXN4Q6P4A7 337 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 GDPD3Q7L5L3 318 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 BPHLQ86WA6 291 aaPredicted RBP12.32□□□□□ -0.44
CLK3-203ENST00000454830 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 TTC9Q92623 222 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 SDHCQ99643 169 aaPredicted RBP12.32□□□□□ -0.44
CLK3-203ENST00000454830 NMNAT2Q9BZQ4 307 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 SRRQ9GZT4 340 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 FBXL2Q9UKC9 423 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 FBXO4Q9UKT5 387 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 WIF1Q9Y5W5 379 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 RTTNQ86VV8 2226 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 PRSS37A4D1T9 235 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 TMEM200CA6NKL6 621 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 STK17BO94768 372 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 TRA2AQ13595 282 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLK3-203ENST00000454830 CARD17Q5XLA6 110 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 XKRXQ6PP77 449 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 TMEM205Q6UW68 189 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 RDH10Q8IZV5 341 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 CELF2-AS1Q8N7Q2 184 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 TRMT10AQ8TBZ6 339 aaKnown RBP12.32□□□□□ -0.44
CLK3-203ENST00000454830 PGLYRP3Q96LB9 341 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 NOX4Q9NPH5 578 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 ST6GALNAC2Q9UJ37 374 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 PADI1Q9ULC6 663 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 DOK2O60496 412 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 PTTG1O95997 202 aa12.32□□□□□ -0.44
CLK3-203ENST00000454830 ZNF823P16415 610 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms