RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 RTN4RQ9BZR6 473 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 MED29Q9NX70 200 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 NPIPA1Q9UND3 350 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 MPZL1O95297 269 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 F10P00742 488 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 POU3F1Q03052 451 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-213ENST00000454468 MAB21L1Q13394 359 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 CCDC28AQ8IWP9 274 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF417Q8TAU3 575 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 AKAP1Q92667 903 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■■■■□ 20
SMPD4-213ENST00000454468 ZNF587Q96SQ5 575 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-213ENST00000454468 INTS14Q96SY0 518 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 VN1R1Q9GZP7 353 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 ANKRD10Q9NXR5 420 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 SUSD2Q9UGT4 822 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 KIF26BQ2KJY2 2108 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 FREM3P0C091 2139 aa10.89□□□□□ -0.67
SMPD4-213ENST00000454468 IGHV1OR21-1A0A087WYE8 117 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 TRBV11-1A0A0K0K1C0 115 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 H0YIG0 161 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 TSPAN4O14817 238 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 GDF9O60383 454 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 PPICP45877 212 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 MAMDC2Q7Z304 686 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 PIAS4Q8N2W9 510 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 PLPP7Q8NBV4 271 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 NPEPL1Q8NDH3 523 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 CHAC2Q8WUX2 184 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 MED30Q96HR3 178 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 CRB3Q9BUF7 120 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 KLK11Q9UBX7 282 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 ING4Q9UNL4 249 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 KIAA1549LQ6ZVL6 1849 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 TMED7-TICAM2A0A0A6YYA0 188 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 A0A1W2PPL8 197 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 ADRB1P08588 477 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 MNDAP41218 407 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 AP2S1P53680 142 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 SLC37A1P57057 533 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 GALK2Q01415 458 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 ACKR1Q16570 336 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF74Q16587 644 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 PYHIN1Q6K0P9 492 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 RPL22L1Q6P5R6 122 aaKnown RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 ARIH2OSQ8N7S6 290 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 OR51D1Q8NGF3 324 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 FAM46BQ96A09 425 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 NXPE2Q96DL1 559 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 SMIM19Q96E16 107 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 MICU1Q9BPX6 476 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 LMF2Q9BU23 707 aaKnown RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 MMP25Q9NPA2 562 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 MRPS18AQ9NVS2 196 aaKnown RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF69Q9UC07 566 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF281Q9Y2X9 895 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 TMED7Q9Y3B3 224 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 V9GY05 133 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 MTRF1O75570 445 aaKnown RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 GLCEO94923 617 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 AKR7A3O95154 331 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 LIPCP11150 499 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 EVI2BP34910 448 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 RBM34P42696 430 aaKnown RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 SPOCK1Q08629 439 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 DMWDQ09019 674 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 EIF2B1Q14232 305 aaKnown RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 PXDC1Q5TGL8 231 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 TMED4Q7Z7H5 227 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 CMTM4Q8IZR5 234 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 OR6V1Q8N148 313 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 OR51A4Q8NGJ6 313 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 WDFY2Q96P53 400 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 GINS4Q9BRT9 223 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 TTYH1Q9H313 450 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 ELL3Q9HB65 397 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 NTMQ9P121 344 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 CHRNA9Q9UGM1 479 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 FARSAQ9Y285 508 aaKnown RBP10.88□□□□□ -0.67
SMPD4-213ENST00000454468 TRAPPC4Q9Y296 219 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 KLHDC2Q9Y2U9 406 aa10.88□□□□□ -0.67
SMPD4-213ENST00000454468 TRAV18A0A075B6X5 111 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ALOX12BO75342 701 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 SCRG1O75711 98 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 GATBO75879 557 aaKnown RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 EPXP11678 715 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ABCD3P28288 659 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 GDNFP39905 211 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 FASLGP48023 281 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 EMP2P54851 167 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 NANOS3P60323 173 aaKnown RBP10.87□□□□□ -0.67
SMPD4-213ENST00000454468 COL28A1Q2UY09 1125 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ZNF440Q8IYI8 595 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 HLA-CQ95604 372 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ST6GAL2Q96JF0 529 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 CMKLR1Q99788 373 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 MED18Q9BUE0 208 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 ISYNA1Q9NPH2 558 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 NRIP3Q9NQ35 241 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 POLE3Q9NRF9 147 aa10.87□□□□□ -0.67
SMPD4-213ENST00000454468 H0YC42 278 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms