RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, human

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-208	ENST00000454323	VENTX	O95231	258 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	H6PD	O95479	791 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	MMP1	P03956	469 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	RNH1	P13489	461 aa	Known RBP	3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	ZNF43	P17038	809 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	IGHV1-2	P23083	117 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	CDKN1B	P46527	198 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	CLDN8	P56748	225 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	EIF3E	P60228	445 aa	Known RBP	3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	KLHL40	Q2TBA0	621 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	EIPR1	Q53HC9	387 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	CARD16	Q5EG05	197 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	PIP5KL1	Q5T9C9	394 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	SLC8B1	Q6J4K2	584 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	LRRC31	Q6UY01	552 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	COPS6	Q7L5N1	327 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	ZNF321P	Q8N8H1	164 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	OR6T1	Q8NGN1	323 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	ZPLD1	Q8TCW7	415 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	ITLN1	Q8WWA0	313 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	3.88	□□□□□ -1.79	2e-7	■■■■■ 62.8
CUL3-208	ENST00000454323	PYGO2	Q9BRQ0	406 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	C20orf24	Q9BUV8	137 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	LRRC61	Q9BV99	259 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	COA1	Q9GZY4	146 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	IQCG	Q9H095	443 aa	Known RBP	3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	REEP4	Q9H6H4	257 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	HEXA-AS1	Q9H8Q6	139 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	PITPNC1	Q9UKF7	332 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	ZNF646	O15015	1829 aa	Predicted RBP	3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	CHD8	Q9HCK8	2581 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	PRUNE2	Q8WUY3	3088 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	MED23	Q9ULK4	1368 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	EYS	Q5T1H1	3165 aa		3.88	□□□□□ -1.79
CUL3-208	ENST00000454323	COL4A1	P02462	1669 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	LAMA2	P24043	3122 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	CACNA1B	Q00975	2339 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	KIF20B	Q96Q89	1820 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	TRAV25	A0A0B4J276	109 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	IQANK1	A0A1B0GTG1	560 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	SMCO3	A2RU48	225 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323		A8MXQ7	604 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323		E9PAM4	449 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	KIF2A	O00139	706 aa	Predicted RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	CDX4	O14627	284 aa	Predicted RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	AKR7A2	O43488	359 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	HCN1	O60741	890 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	PIGR	P01833	764 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	SERPIND1	P05546	499 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	RDX	P35241	583 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ATP5C1	P36542	298 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	VHL	P40337	213 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	RPS5	P46782	204 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	RPL29	P47914	159 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ACLY	P53396	1101 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	LMO4	P61968	165 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	KCNJ2	P63252	427 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	PAX8	Q06710	450 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	DOC2A	Q14183	400 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	SLC10A1	Q14973	349 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	OXA1L	Q15070	435 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	DGUOK	Q16854	277 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	GLYR1	Q49A26	553 aa	Predicted RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	TMEM53	Q6P2H8	277 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	SASS6	Q6UVJ0	657 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ZNF600	Q6ZNG1	722 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	SLC25A48	Q6ZT89	311 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	EIF3M	Q7L2H7	374 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	TIPARP	Q7Z3E1	657 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ERI1	Q8IV48	349 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	TPRX1	Q8N7U7	411 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	OR56B4	Q8NH76	319 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	GIMAP1	Q8WWP7	306 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	UFD1	Q92890	307 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	PSMG2	Q969U7	264 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ISG20	Q96AZ6	181 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	MS4A14	Q96JA4	679 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	LINC00479	Q96M42	142 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ZNF578	Q96N58	590 aa	Predicted RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	MCRIP2	Q9BUT9	160 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	CHIA	Q9BZP6	476 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ELOVL4	Q9GZR5	314 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	RACGAP1	Q9H0H5	632 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	DNTTIP1	Q9H147	329 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ADNP	Q9H2P0	1102 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	TDRD3	Q9H7E2	651 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	INPP5E	Q9NRR6	644 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	PDP1	Q9P0J1	537 aa	Predicted RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	ARMCX1	Q9P291	453 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	PEF1	Q9UBV8	284 aa	Known RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	PACSIN2	Q9UNF0	486 aa	Predicted RBP	3.87	□□□□□ -1.79
CUL3-208	ENST00000454323	NCOR1	O75376	2440 aa		3.87	□□□□□ -1.79
CUL3-208	ENST00000454323		A0A1W2PPR1	153 aa		3.86	□□□□□ -1.79
CUL3-208	ENST00000454323	EFCAB7	A8K855	629 aa		3.86	□□□□□ -1.79
CUL3-208	ENST00000454323		A8MX80	341 aa		3.86	□□□□□ -1.79
CUL3-208	ENST00000454323	SUPT3H	B4E1H0	165 aa		3.86	□□□□□ -1.79
CUL3-208	ENST00000454323	LSM1	O15116	133 aa	Known RBP	3.86	□□□□□ -1.79
CUL3-208	ENST00000454323	CLOCK	O15516	846 aa		3.86	□□□□□ -1.79
CUL3-208	ENST00000454323	SLITRK3	O94933	977 aa		3.86	□□□□□ -1.79
CUL3-208	ENST00000454323	C1orf105	O95561	183 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms