RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 OR11A1Q9GZK7 315 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 VCPKMTQ9H867 229 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 PATZ1Q9HBE1 687 aaKnown RBP2.19□□□□□ -2.06
SSXP1-201ENST00000453640 PALMDQ9NP74 551 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 SMOXQ9NWM0 555 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 PRPF19Q9UMS4 504 aaKnown RBP2.19□□□□□ -2.06
SSXP1-201ENST00000453640 TIMM10BQ9Y5J6 103 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 CACNG2Q9Y698 323 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 MAP3K5Q99683 1374 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 C4AP0C0L4 1744 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 COL24A1Q17RW2 1714 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 SLX4Q8IY92 1834 aa2.19□□□□□ -2.06
SSXP1-201ENST00000453640 USP42Q9H9J4 1324 aaKnown RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 MAPK8IP3Q9UPT6 1336 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 SBF1O95248 1867 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 KCPQ6ZWJ8 1503 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 CICQ96RK0 1608 aaPredicted RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 HIP1O00291 1037 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 AGPAT2O15120 278 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 MAGEB4O15481 346 aaPredicted RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 DFNA5O60443 496 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 P04436 131 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ICAM2P13598 275 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ZNF44P15621 663 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 CRISP2P16562 243 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 RCC1P18754 421 aaPredicted RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ATP6V1B2P21281 511 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 CXCR2P25025 360 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 GCAP28676 217 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 GLP1RP43220 463 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 RPS10P46783 165 aaKnown RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 CASP4P49662 377 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 SH3BGRP55822 239 aaPredicted RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 TGFBR3Q03167 851 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 KLRB1Q12918 225 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 VGLL4Q14135 290 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 WDR43Q15061 677 aaKnown RBP eCLIP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 NRF1Q16656 503 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 MICBQ29980 383 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 PAGE3Q5JUK9 113 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ATAD3BQ5T9A4 648 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 OR2G6Q5TZ20 316 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ZNF691Q5VV52 312 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 C6orf89Q6UWU4 347 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 TMIGD1Q6UXZ0 262 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ACP7Q6ZNF0 438 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ARIH2OSQ8N7S6 290 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 STEAP2Q8NFT2 490 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 OR2T3Q8NH03 318 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 OR6X1Q8NH79 312 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 STARD4Q96DR4 205 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 TM4SF19Q96DZ7 209 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 COQ2Q96H96 371 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 OR2M2Q96R28 347 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 RASL11BQ9BPW5 248 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 REEP4Q9H6H4 257 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 RANBP3Q9H6Z4 567 aaPredicted RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 CYTL1Q9NRR1 136 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 CGNQ9P2M7 1197 aaKnown RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 NUFIP1Q9UHK0 495 aaKnown RBP2.18□□□□□ -2.06
SSXP1-201ENST00000453640 STAP1Q9ULZ2 295 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 SNX6Q9UNH7 406 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 CARMIL3Q8ND23 1372 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ADAMTS7Q9UKP4 1686 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 UBR2Q8IWV8 1755 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ANKRD31Q8N7Z5 1873 aa2.18□□□□□ -2.06
SSXP1-201ENST00000453640 ASTN1O14525 1302 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 KIAA1551Q9HCM1 1747 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 TRBV6-6A0A0A6YYG2 114 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 IGKV6-21A0A0C4DH24 114 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 METTL21EPA6NDL7 271 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 FAM166BA8MTA8 275 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 PRRG1O14668 218 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 SNAI2O43623 268 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 KLK3P07288 261 aaPredicted RBP2.17□□□□□ -2.06
SSXP1-201ENST00000453640 DBTP11182 482 aaKnown RBP2.17□□□□□ -2.06
SSXP1-201ENST00000453640 IL12AP29459 219 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 DDOSTP39656 456 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 RPL13AP40429 203 aaKnown RBP2.17□□□□□ -2.06
SSXP1-201ENST00000453640 GRIA1P42261 906 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 ARRB1P49407 418 aaPredicted RBP2.17□□□□□ -2.06
SSXP1-201ENST00000453640 UNC119Q13432 240 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 ATP6AP1Q15904 470 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 BCL7AQ4VC05 210 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 SFT2D3Q587I9 215 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 CARD16Q5EG05 197 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 CTRB2Q6GPI1 263 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 OR52E8Q6IFG1 317 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 HSDL2Q6YN16 418 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 Q6ZPB1 254 aaPredicted RBP2.17□□□□□ -2.06
SSXP1-201ENST00000453640 COPS6Q7L5N1 327 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 ZNF429Q86V71 674 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 NBPF5PQ86XG9 351 aaPredicted RBP2.17□□□□□ -2.06
SSXP1-201ENST00000453640 TMEM123Q8N131 208 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 MDS2Q8NDY4 140 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 TRPV1Q8NER1 839 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 OR4K14Q8NGD5 310 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 OR51G1Q8NGK1 321 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 MAIP1Q8WWC4 291 aa2.17□□□□□ -2.06
SSXP1-201ENST00000453640 PARD6BQ9BYG5 372 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms