RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 POTEKPQ9BYX7 375 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 CXorf56Q9H5V9 222 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 MGAT4BQ9UQ53 548 aa15.91■□□□□ 0.14
SQSTM1-204ENST00000453046 FREM1Q5H8C1 2179 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 A0A087WUU8 490 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 OR10H3O60404 316 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 PMS2P2O95744 297 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 CD3EP07766 207 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 CDH2P19022 906 aaPredicted RBP15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 CLK1P49759 484 aaKnown RBP15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 RAD23AP54725 363 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 OR2B6P58173 313 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 ABLIM2Q6H8Q1 611 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 PRSS57Q6UWY2 283 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 MBOAT2Q6ZWT7 520 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 ADGRG3Q86Y34 549 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 NKAIN4Q8IVV8 208 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 RNF113BQ8IZP6 322 aaKnown RBP15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 UBE2J2Q8N2K1 259 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 ZNF611Q8N823 705 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 AQP11Q8NBQ7 271 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 PIGXQ8TBF5 258 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 DDIT4LQ96D03 193 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 ARL5BQ96KC2 179 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 SMR3AQ99954 134 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 TMEM204Q9BSN7 226 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 DGCR6LQ9BY27 220 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 OR11A1Q9GZK7 315 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 ZNF556Q9HAH1 456 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 SMURF2Q9HAU4 748 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 ENOPH1Q9UHY7 261 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 TMEFF2Q9UIK5 374 aaPredicted RBP15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 NOSIPQ9Y314 301 aaKnown RBP15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 RNF115Q9Y4L5 304 aa15.9■□□□□ 0.14
SQSTM1-204ENST00000453046 A0A087WUJ7 227 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 TMED7-TICAM2A0A0A6YYA0 188 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 PRKACGP22612 351 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 PTH2RP49190 550 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 DAPP51397 102 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 POLR2HP52434 150 aaKnown RBP15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 PDK3Q15120 406 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 NCMAPQ5T1S8 102 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 PGBD2Q6P3X8 592 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 CLEC9AQ6UXN8 241 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 WDR88Q6ZMY6 472 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 Q71RC1 249 aaPredicted RBP15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 ATG4DQ86TL0 474 aaPredicted RBP15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 PARP8Q8N3A8 854 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 TMEM255BQ8WV15 326 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 TMEM239Q8WW34 195 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 MUCL1Q96DR8 90 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 POM121Q96HA1 1249 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 FEVQ99581 238 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 GSX2Q9BZM3 304 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 SLC19A3Q9BZV2 496 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 ADAM19Q9H013 955 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 KRT84Q9NSB2 600 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 LAMP3Q9UQV4 416 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 TMEM5Q9Y2B1 443 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 POFUT2Q9Y2G5 429 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 TMED7Q9Y3B3 224 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 PRR14LQ5THK1 2151 aa15.89■□□□□ 0.13
SQSTM1-204ENST00000453046 FAM171A2A8MVW0 826 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 GPR171O14626 319 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 DNPH1O43598 174 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 CNOT4O95628 575 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 EDNRAP25101 427 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 TACR3P29371 465 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 LINC00114Q6XXX2 140 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 RRM2BQ7LG56 351 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 RNF217Q8TC41 542 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 FBXW5Q969U6 566 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 APH1AQ96BI3 265 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 TMEM43Q9BTV4 400 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 PAPOLBQ9NRJ5 636 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 OSGIN1Q9UJX0 560 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 MED31Q9Y3C7 131 aa15.88■□□□□ 0.13
SQSTM1-204ENST00000453046 IGKV3D-15A0A087WSY6 115 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 TMEM72A0PK05 275 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 HTR3EA5X5Y0 456 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 ELOA3DA6NLF2 546 aaPredicted RBP15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 H7C1Q1 480 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 DLGAP1O14490 977 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 SMAD7O15105 426 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 ZNF208O43345 1280 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 EIF1BO60739 113 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 TMCC2O75069 709 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 MRPL33O75394 65 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 IGF2P01344 180 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 IGHV3-9P01782 118 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 GSTM3P21266 225 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 IGHV1-2P23083 117 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 SLC35A1P78382 337 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 PPA1Q15181 289 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 ELOA3BQ3SY89 546 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 FBXW9Q5XUX1 488 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 C1orf94Q6P1W5 598 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 CCDC103Q8IW40 242 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 NRMQ8IXM6 262 aa15.87■□□□□ 0.13
SQSTM1-204ENST00000453046 ELOA3Q8NG57 546 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms