RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 FAM157AC9JC47 383 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 MS4A18H0YCH9 400 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 TPST1O60507 370 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 NCR1O76036 304 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 BGLAPP02818 100 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 SAGP10523 405 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-210ENST00000453030 ETS2P15036 469 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 HOXB9P17482 250 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-210ENST00000453030 PCMT1P22061 227 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 AHCYP23526 432 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 AQP1P29972 269 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 GIPRP48546 466 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 SEC24CP53992 1094 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 GALK2Q01415 458 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 PUDPQ08623 228 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 PMS2P3Q13401 168 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 MS4A18Q3C1V0 323 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 ALKBH6Q3KRA9 238 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 ULK3Q6PHR2 472 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 DHRS4L2Q6PKH6 230 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 C12orf54Q6X4T0 127 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 LRP11Q86VZ4 500 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 KRT73Q86Y46 540 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 CLDND2Q8NHS1 167 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 SLC47A1Q96FL8 570 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 EPYCQ99645 322 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 FOXB1Q99853 325 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 SLC25A37Q9NYZ2 338 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 ZNF224Q9NZL3 707 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 SPEF1Q9Y4P9 236 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 CORINQ9Y5Q5 1042 aa10.04□□□□□ -0.8
GARNL3-210ENST00000453030 A0A0B4J2E0 115 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 LOC102725191A0A1B0GVB3 256 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 A0A1B0GX12 115 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 ZNF726A6NNF4 738 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 C11orf98E9PRG8 122 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 WNT9BO14905 357 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 VENTXO95231 258 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 PATE4P0C8F1 98 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 NAT2P11245 290 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 ZNF35P13682 527 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 GLRXP35754 106 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 CSNK1A1P48729 337 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 EVX1P49640 407 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 STX1BP61266 288 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 RPS23P62266 143 aaKnown RBP10.03□□□□□ -0.8
GARNL3-210ENST00000453030 RAB1AP62820 205 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 CDK6Q00534 326 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 SCARB2Q14108 478 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 RAB39AQ14964 217 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 OR1Q1Q15612 314 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 FAM91A1Q658Y4 838 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 REEP3Q6NUK4 255 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 SHQ1Q6PI26 577 aaKnown RBP10.03□□□□□ -0.8
GARNL3-210ENST00000453030 UGT2A3Q6UWM9 527 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 THSD4Q6ZMP0 1018 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 NET1Q7Z628 596 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-210ENST00000453030 MSRB3Q8IXL7 192 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 SCAIQ8N9R8 606 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 YIPF5Q969M3 257 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 SLC41A3Q96GZ6 507 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 LRR1Q96L50 414 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 ZNF75AQ96N20 296 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 WFDC6Q9BQY6 131 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 SPATA5L1Q9BVQ7 753 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 OR51B6Q9H340 312 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 MS4A5Q9H3V2 200 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 TMEM27Q9HBJ8 222 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 ZNF275Q9NSD4 429 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-210ENST00000453030 HIF1ANQ9NWT6 349 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 NKIRAS1Q9NYS0 192 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 TREM2Q9NZC2 230 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 SLAMF8Q9P0V8 285 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 DUSP13Q9UII6 198 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 METRNQ9UJH8 293 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 SLC13A4Q9UKG4 626 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 RAB21Q9UL25 225 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 TANC2Q9HCD6 1990 aa10.03□□□□□ -0.8
GARNL3-210ENST00000453030 PPIHO43447 177 aaKnown RBP10.02□□□□□ -0.81
GARNL3-210ENST00000453030 UBL3O95164 117 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 MSMBP08118 114 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 ACHEP22303 614 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 COL8A2P25067 703 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 LSP1P33241 339 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 BIDP55957 195 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 ACTG1P63261 375 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 FXNQ16595 210 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 LRIF1Q5T3J3 769 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 ZNF627Q7L945 461 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 CROCCP2Q86T23 111 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 RANBP3LQ86VV4 465 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-210ENST00000453030 SNX32Q86XE0 403 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 SEMA6DQ8NFY4 1073 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 RDH5Q92781 318 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 TMEM186Q96B77 213 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 LRRC37BQ96QE4 947 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 IKZF5Q9H5V7 419 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 MRPL39Q9NYK5 338 aaKnown RBP10.02□□□□□ -0.81
GARNL3-210ENST00000453030 CCDC167Q9P0B6 97 aa10.02□□□□□ -0.81
GARNL3-210ENST00000453030 VAPAQ9P0L0 249 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms