RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 MDH1P40925 334 aaKnown RBP16.84■□□□□ 0.29
USP40-207ENST00000450940 NUDT6P53370 316 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 CAMK2DQ13557 499 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 HSP90B2PQ58FF3 399 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 CARD17Q5XLA6 110 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 CARM1Q86X55 608 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 MAPK1IP1LQ8NDC0 245 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 NUP37Q8NFH4 326 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 OR6X1Q8NH79 312 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 SEC61A2Q9H9S3 476 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 MEPEQ9NQ76 525 aaPredicted RBP16.84■□□□□ 0.29
USP40-207ENST00000450940 ABCA2Q9BZC7 2435 aa16.84■□□□□ 0.29
USP40-207ENST00000450940 FAM220BPB1ANY3 271 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 OR6A2O95222 327 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 CELA3BP08861 270 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 KDELR2P33947 212 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 SERPINF1P36955 418 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 RBM34P42696 430 aaKnown RBP16.83■□□□□ 0.28
USP40-207ENST00000450940 EFNA4P52798 201 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 HGFACQ04756 655 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 SLC46A3Q7Z3Q1 461 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 MYPOPQ86VE0 399 aaPredicted RBP16.83■□□□□ 0.28
USP40-207ENST00000450940 LRRC17Q8N6Y2 441 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 IL17RDQ8NFM7 739 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 RP9Q8TA86 221 aaKnown RBP16.83■□□□□ 0.28
USP40-207ENST00000450940 TMEM54Q969K7 222 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 ZNF75AQ96N20 296 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 JMJD1CQ15652 2540 aa16.83■□□□□ 0.28
USP40-207ENST00000450940 IGHV4-30-2A0A087WSY4 118 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 B9A039 149 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 INAFM1C9JVW0 142 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 C11orf98E9PRG8 122 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 OR5F1O95221 314 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 F12P00748 615 aaPredicted RBP16.82■□□□□ 0.28
USP40-207ENST00000450940 THRBP10828 461 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 IFNGR1P15260 489 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 BIDP55957 195 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 EFNB3Q15768 340 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 ADIPOQQ15848 244 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 CLEC2AQ6UVW9 174 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 SLC35D2Q76EJ3 337 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 MDP1Q86V88 176 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 OR2T12Q8NG77 320 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 OR6N1Q8NGY5 312 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 LIPHQ8WWY8 451 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 HTRA1Q92743 480 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 FBXO17Q96EF6 278 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 ULBP2Q9BZM5 246 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 DENND2DQ9H6A0 471 aaPredicted RBP16.82■□□□□ 0.28
USP40-207ENST00000450940 ZNF442Q9H7R0 627 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 RIMS3Q9UJD0 308 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 POFUT2Q9Y2G5 429 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 AP3M1Q9Y2T2 418 aa16.82■□□□□ 0.28
USP40-207ENST00000450940 ANK3Q12955 4377 aaKnown RBP16.81■□□□□ 0.28
USP40-207ENST00000450940 CHD3Q12873 2000 aaKnown RBP16.81■□□□□ 0.28
USP40-207ENST00000450940 IGHV2OR16-5A0A0B4J2B6 119 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 SEC14L2O76054 403 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 MT-ND1P03886 318 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 HIST1H2ABP04908 130 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 TSPAN19P0C672 248 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 TNFRSF1BP20333 461 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 PCSK6P29122 969 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 CSNK1A1P48729 337 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 IDH3GP51553 393 aaPredicted RBP16.81■□□□□ 0.28
USP40-207ENST00000450940 CYBRD1Q53TN4 286 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 ZNF813Q6ZN06 617 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 HIST3H2AQ7L7L0 130 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 NKAIN4Q8IVV8 208 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 MICU2Q8IYU8 434 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 HIST1H2ACQ93077 130 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 RCN3Q96D15 328 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 SLC25A44Q96H78 314 aaPredicted RBP16.81■□□□□ 0.28
USP40-207ENST00000450940 FOXB1Q99853 325 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 PLK3Q9H4B4 646 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 CMTM6Q9NX76 183 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 GLTPQ9NZD2 209 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 ZNF224Q9NZL3 707 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
USP40-207ENST00000450940 SONP18583 2426 aaKnown RBP16.81■□□□□ 0.28
USP40-207ENST00000450940 ELOVL7A1L3X0 281 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 KPNA4O00629 521 aaPredicted RBP16.8■□□□□ 0.28
USP40-207ENST00000450940 SERPINI2O75830 405 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 HLA-HP01893 362 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 CSF3P09919 207 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 OR4A8P0C604 315 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 OR1E2P47887 323 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 TAS2R41P59536 307 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 SNRPD2P62316 118 aaKnown RBP16.8■□□□□ 0.28
USP40-207ENST00000450940 SELENOWP63302 87 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 PPP2R2BQ00005 443 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 PIN1Q13526 163 aaPredicted RBP16.8■□□□□ 0.28
USP40-207ENST00000450940 GSG1Q2KHT4 349 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 LRFN4Q6PJG9 635 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 PIWIL3Q7Z3Z3 882 aaKnown RBP16.8■□□□□ 0.28
USP40-207ENST00000450940 ARPINQ7Z6K5 226 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 SLC15A3Q8IY34 581 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 ZNF525Q8N782 197 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 POU5F2Q8N7G0 328 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 C10orf105Q8TEF2 133 aa16.8■□□□□ 0.28
USP40-207ENST00000450940 NOX3Q9HBY0 568 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms