RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CDK20Q8IZL9 346 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 LRRC75AQ8NAA5 344 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 MOSPD2Q8NHP6 518 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 MAGEE2Q8TD90 523 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-203ENST00000450867 TMEM54Q969K7 222 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 ALKBH3Q96Q83 286 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-203ENST00000450867 EMC6Q9BV81 110 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 GPR35Q9HC97 309 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 INIPQ9NRY2 104 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 SLC7A8Q9UHI5 535 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 LYVE1Q9Y5Y7 322 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 SLC25A15Q9Y619 301 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 AKAP9Q99996 3911 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 A0A1W2PRG6 482 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 TCRBV3S1A0A5B6 114 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 CIB4A0PJX0 185 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 CLOCKO15516 846 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 RAD51DO75771 328 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 PGA4P0DJD7 388 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 PGA3P0DJD8 388 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 RAP2AP10114 183 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 SAGP10523 405 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 HOXB1P14653 301 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 RRM2P31350 389 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 ZNF133P52736 654 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 NR1H2P55055 460 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 BIDP55957 195 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 PRPS1P60891 318 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 SPIBQ01892 262 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 ROR2Q01974 943 aaKnown RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 FLOT2Q14254 428 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 PPA1Q15181 289 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 ARMC4Q5T2S8 1044 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 ASRGL1Q7L266 308 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 RRM2BQ7LG56 351 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 OAFQ86UD1 273 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 GPR137CQ8N3F9 429 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 OR4C15Q8NGM1 316 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 OR1K1Q8NGR3 316 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 ASB10Q8WXI3 467 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 BCL2L2Q92843 193 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 SLC25A44Q96H78 314 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 ZC3HAV1LQ96H79 300 aaKnown RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 LRGUKQ96M69 825 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 TMEM204Q9BSN7 226 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 POLDIP3Q9BY77 421 aaKnown RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 MRPL13Q9BYD1 178 aaKnown RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 CLEC4MQ9H2X3 399 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 TXNIPQ9H3M7 391 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 NELFAQ9H3P2 528 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 NGBQ9NPG2 151 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 OBP2BQ9NPH6 170 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 KRCC1Q9NPI7 259 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 SLC17A5Q9NRA2 495 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 STX18Q9P2W9 335 aaKnown RBP12.6□□□□□ -0.39
COL3A1-203ENST00000450867 AMDHD2Q9Y303 409 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 DSCAMO60469 2012 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 OTOGQ6ZRI0 2925 aa12.6□□□□□ -0.39
COL3A1-203ENST00000450867 ARPC4-TTLL3A0A0A6YYG9 625 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.59□□□□□ -0.39
COL3A1-203ENST00000450867 A0A1W2PPR1 153 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 DHRS12A0PJE2 317 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 ZNF726A6NNF4 738 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 PTP4A3O75365 173 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 KRT33AO76009 404 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 BCL10O95999 233 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 F13BP05160 661 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 ZNF26P17031 533 aaPredicted RBP12.59□□□□□ -0.39
COL3A1-203ENST00000450867 PAX7P23759 505 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 GPR4P46093 362 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 DAP3P51398 398 aaKnown RBP12.59□□□□□ -0.39
COL3A1-203ENST00000450867 FOXD4Q12950 439 aaPredicted RBP12.59□□□□□ -0.39
COL3A1-203ENST00000450867 CAMK2DQ13557 499 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 LAPTM4AQ15012 233 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 ACKR1Q16570 336 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 ZBED5Q49AG3 693 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 ALG10Q5BKT4 473 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 PHYHD1Q5SRE7 291 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 HMBOX1Q6NT76 420 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 ANKRD16Q6P6B7 361 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 ZER1Q7Z7L7 766 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 TMEM200AQ86VY9 491 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 CDC20BQ86Y33 519 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 WFDC8Q8IUA0 241 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 LINC00471Q8N535 108 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 WDR31Q8NA23 367 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 PAPD5Q8NDF8 572 aaKnown RBP12.59□□□□□ -0.39
COL3A1-203ENST00000450867 OR13C2Q8NGS9 318 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 OR52J3Q8NH60 311 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 MUCL1Q96DR8 90 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 FAM46AQ96IP4 442 aaKnown RBP12.59□□□□□ -0.39
COL3A1-203ENST00000450867 ALPK1Q96QP1 1244 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 TNFRSF13CQ96RJ3 184 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 GPX7Q96SL4 187 aaPredicted RBP12.59□□□□□ -0.39
COL3A1-203ENST00000450867 PLEKHF2Q9H8W4 249 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 CRLF2Q9HC73 371 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 B3GAT2Q9NPZ5 323 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 NPAP1Q9NZP6 1156 aa12.59□□□□□ -0.39
COL3A1-203ENST00000450867 SIGLEC7Q9Y286 467 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms