RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 HOXB5P09067 269 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CXCL8P10145 99 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 HOXA5P20719 270 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MSX1P28360 303 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CD80P33681 288 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 IRS1P35568 1242 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RAD52P43351 418 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CSNK1A1P48729 337 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RAB7AP51149 207 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SELENOVP59797 346 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 BPIFB3P59826 476 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ERVS71-1P61550 626 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MC1RQ01726 317 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SP2Q02086 613 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DSC2Q02487 901 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR5I1Q13606 314 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DECR1Q16698 335 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ST3GAL2Q16842 350 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ANKRD39Q53RE8 183 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DCAF10Q5QP82 559 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC25A30Q5SVS4 291 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 GPR157Q5UAW9 335 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC27A1Q6PCB7 646 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CEACAM20Q6UY09 585 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DPPA4Q7L190 304 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ADGRE4PQ86SQ3 457 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF429Q86V71 674 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 GKN2Q86XP6 184 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 THNSL2Q86YJ6 484 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 FBXO16Q8IX29 292 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 TMEM183AQ8IXX5 376 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SYS1Q8N2H4 156 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 NHLRC2Q8NBF2 726 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 NAXEQ8NCW5 288 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR8J2Q8NGG1 315 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR6N1Q8NGY5 312 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CMTM2Q8TAZ6 248 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CA5BP1Q8WTZ4 195 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SMPDL3BQ92485 455 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 C5orf34Q96MH7 638 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SPATA33Q96N06 139 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF583Q96ND8 569 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DCBLD2Q96PD2 775 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TAAR1Q96RJ0 339 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CMKLR1Q99788 373 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ORAI3Q9BRQ5 295 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ARHGAP9Q9BRR9 750 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MRPL37Q9BZE1 423 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 OR52D1Q9H346 318 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 KIR3DX1Q9H7L2 352 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MYOZ2Q9NPC6 264 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 GKN1Q9NS71 199 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 COPS7AQ9UBW8 275 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 IL17BQ9UHF5 180 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RALYQ9UKM9 306 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 DTX4Q9Y2E6 619 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 MTCH2Q9Y6C9 303 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PIAS3Q9Y6X2 628 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TRAV18A0A075B6X5 111 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TMEM238LA0A1B0GVL6 79 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PRAMEF27A3QJZ7 478 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CLEC18AA5D8T8 446 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PRAMEF25A6NGN4 478 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 GPR31O00270 319 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PRAMEF4O60810 478 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 LILRB3O75022 631 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RBMXL2O75526 392 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC25A14O95258 325 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC25A27O95847 323 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 H2AFB1P0C5Y9 115 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR2T7P0C7T2 308 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DRD2P14416 443 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ITGB5P18084 799 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TACR2P21452 398 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CD1CP29017 333 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RPL29P47914 159 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 TNFSF10P50591 281 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 FABP6P51161 128 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RPS20P60866 119 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 TRA2BP62995 288 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 SH3BP2P78314 561 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SRSF4Q08170 494 aaKnown RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF154Q13106 437 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CBFBQ13951 182 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TEAD2Q15562 447 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 C2orf76Q3KRA6 126 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 C10orf120Q5SQS8 335 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 PRAMEF9Q5VWM5 478 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 C12orf73Q69YU5 71 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 STUMQ69YW2 141 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZNF322Q6U7Q0 402 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 UNQ6126/PRO20091Q6UXV3 157 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 RNF111Q6ZNA4 994 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 USP50Q70EL3 339 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC35E3Q7Z769 313 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 C17orf64Q86WR6 236 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TEX26Q8N6G2 289 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SLC35G3Q8N808 338 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 CLEC18CQ8NCF0 446 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 OR11H7Q8NGC8 314 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms