RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 FKBP7Q9Y680 259 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 HIVEP2P31629 2446 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 JMJD1CQ15652 2540 aa13.28□□□□□ -0.28
CHD3-205ENST00000449744 CSPG4Q6UVK1 2322 aa13.27□□□□□ -0.28
CHD3-205ENST00000449744 B9A039 149 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 PDE5AO76074 875 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 LYPD3O95274 346 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 CELA3BP08861 270 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 CSF3P09919 207 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 OR4A8P0C604 315 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 CD79AP11912 226 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 IFNGR1P15260 489 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 CALCRP30988 508 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 TAS2R41P59536 307 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 SWI5Q1ZZU3 235 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 MST1LQ2TV78 715 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 ZNF813Q6ZN06 617 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 DEF8Q6ZN54 512 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 SLC35D2Q76EJ3 337 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 SLC46A3Q7Z3Q1 461 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 MDP1Q86V88 176 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 ZNF525Q8N782 197 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 IL17RDQ8NFM7 739 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 OR10H5Q8NGA6 315 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 C10orf82Q8WW14 230 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 VRK1Q99986 396 aaPredicted RBP13.27□□□□□ -0.29
CHD3-205ENST00000449744 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 ZNF229Q9UJW7 825 aa13.27□□□□□ -0.29
CHD3-205ENST00000449744 FN1P02751 2386 aaKnown RBP13.27□□□□□ -0.29
CHD3-205ENST00000449744 FAM220BPB1ANY3 271 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 SLC22A2O15244 555 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 F12P00748 615 aaPredicted RBP13.26□□□□□ -0.29
CHD3-205ENST00000449744 SLC25A16P16260 332 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 CRYBA2P53672 197 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 KRTAP1-1Q07627 177 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 ZP4Q12836 540 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 GSG1Q2KHT4 349 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 LRRC23Q53EV4 343 aaPredicted RBP13.26□□□□□ -0.29
CHD3-205ENST00000449744 NHLRC1Q6VVB1 395 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 NANOGNBQ7Z5D8 188 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 TSPYL5Q86VY4 417 aaPredicted RBP13.26□□□□□ -0.29
CHD3-205ENST00000449744 LRRC17Q8N6Y2 441 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 NUP37Q8NFH4 326 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 OR6X1Q8NH79 312 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 ZNF583Q96ND8 569 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 FOXB1Q99853 325 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 ZNF426Q9BUY5 554 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 POLR2J2Q9GZM3 115 aaKnown RBP13.26□□□□□ -0.29
CHD3-205ENST00000449744 POLR2J3Q9H1A7 115 aaKnown RBP13.26□□□□□ -0.29
CHD3-205ENST00000449744 CCDC134Q9H6E4 229 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 TAS2R5Q9NYW4 299 aa13.26□□□□□ -0.29
CHD3-205ENST00000449744 FBXO9Q9UK97 447 aaPredicted RBP13.26□□□□□ -0.29
CHD3-205ENST00000449744 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
CHD3-205ENST00000449744 ZNF503-AS2A6NEH8 195 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 TLX2O43763 284 aaPredicted RBP13.25□□□□□ -0.29
CHD3-205ENST00000449744 CD5LO43866 347 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 SHOX2O60902 331 aaPredicted RBP13.25□□□□□ -0.29
CHD3-205ENST00000449744 OR5F1O95221 314 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 HLA-HP01893 362 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 B4GALT1P15291 398 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 TNFRSF1BP20333 461 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 IFNA8P32881 189 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 KDELR2P33947 212 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 PIGFQ07326 219 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 EFNB3Q15768 340 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 ADIPOQQ15848 244 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 MYPOPQ86VE0 399 aaPredicted RBP13.25□□□□□ -0.29
CHD3-205ENST00000449744 OR2T12Q8NG77 320 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 RP9Q8TA86 221 aaKnown RBP13.25□□□□□ -0.29
CHD3-205ENST00000449744 ZNF566Q969W8 418 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 RCN3Q96D15 328 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 PRSS27Q9BQR3 290 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 ZNF442Q9H7R0 627 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 MED4Q9NPJ6 270 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 YAE1D1Q9NRH1 226 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 GLTPQ9NZD2 209 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 ARMCX1Q9P291 453 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 RIMS3Q9UJD0 308 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 AP3M1Q9Y2T2 418 aa13.25□□□□□ -0.29
CHD3-205ENST00000449744 ALPK2Q86TB3 2170 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 CR1P17927 2039 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 IGHV2OR16-5A0A0B4J2B6 119 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 ELOVL7A1L3X0 281 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 BLOC1S5-TXNDC5H3BN57 136 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 ENTPD5O75356 428 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 LY6HO94772 140 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 UBL3O95164 117 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 RAB36O95755 333 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 BCL10O95999 233 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 MT-ND1P03886 318 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 ASAH2BP0C7U1 165 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 NPR2P20594 1047 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 THBS4P35443 961 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 MDH1P40925 334 aaKnown RBP13.24□□□□□ -0.29
CHD3-205ENST00000449744 RBM34P42696 430 aaKnown RBP13.24□□□□□ -0.29
CHD3-205ENST00000449744 OR1E2P47887 323 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 PTDSS1P48651 473 aaKnown RBP13.24□□□□□ -0.29
CHD3-205ENST00000449744 PDLIM4P50479 330 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 HGFACQ04756 655 aa13.24□□□□□ -0.29
CHD3-205ENST00000449744 PIN1Q13526 163 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms