RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 FIGLAQ6QHK4 219 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 MARCH3Q86UD3 253 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 CPXM2Q8N436 756 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 CDRT4Q8N9R6 151 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 OR4N2Q8NGD1 307 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 PPP1R1CQ8WVI7 109 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF707Q96C28 371 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 SMIM19Q96E16 107 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 TINAGL1Q9GZM7 467 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-204ENST00000449510 C12orf10Q9HB07 376 aa11.39□□□□□ -0.59
UBE3B-204ENST00000449510 ARID2Q68CP9 1835 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 IGLV3-16A0A075B6K0 115 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 RAB40ALP0C0E4 278 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 IL12BP29460 328 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 SNRPEP62304 92 aaKnown RBP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 CDKN3Q16667 212 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 MEP1BQ16820 701 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 CARD17Q5XLA6 110 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 TMEM215Q68D42 235 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 MRM1Q6IN84 353 aaKnown RBP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF529Q6P280 563 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF547Q8IVP9 402 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 CDH26Q8IXH8 852 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 OR9A4Q8NGU2 314 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 RAB40AQ8WXH6 277 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 ZC3HAV1LQ96H79 300 aaKnown RBP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 PCDHB10Q9UN67 800 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 PCDHGA5Q9Y5G8 931 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 OIP5O43482 229 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 MTRF1O75570 445 aaKnown RBP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 LATS1O95835 1130 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF273Q14593 569 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 DCAF12L2Q5VW00 463 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 GLDNQ6ZMI3 551 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 P4HA3Q7Z4N8 544 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 SLC35F3Q8IY50 421 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 DEFB119Q8N690 84 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 OR4D10Q8NGI6 311 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 OR1S2Q8NGQ3 325 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 TOMM40LQ969M1 308 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 FAM3DQ96BQ1 224 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 MYADMQ96S97 322 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 ADOQ96SZ5 270 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 TAS2R5Q9NYW4 299 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 ANK1P16157 1881 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 A0A1B0GUH1 482 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 TSPAN11A1L157 253 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF98A6NK75 572 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 PRRT4C9JH25 899 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 AIPO00170 330 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 APBB3O95704 486 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 LDOC1O95751 146 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 RNH1P13489 461 aaKnown RBP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 PRKAR1BP31321 381 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 BAMBIQ13145 260 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 HNF4GQ14541 408 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 EIF5AL1Q6IS14 154 aaKnown RBP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF550Q7Z398 422 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 CSNK1A1LQ8N752 337 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 NEK7Q8TDX7 302 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 HERVK_113Q902F9 699 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 RAB11FIP5Q9BXF6 653 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 SAGE1Q9NXZ1 904 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 FBXL21Q9UKT6 434 aa11.38□□□□□ -0.59
UBE3B-204ENST00000449510 PUS1Q9Y606 427 aaKnown RBP eCLIP11.38□□□□□ -0.59
UBE3B-204ENST00000449510 RPS10-NUDT3A0A1W2PQS6 291 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 OR6C65A6NJZ3 312 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 TSPAN15O95858 294 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 APOC1P02654 83 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 TUBG1P23258 451 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 RPS10P46783 165 aaKnown RBP11.37□□□□□ -0.59
UBE3B-204ENST00000449510 EOGTQ5NDL2 527 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 AVPI1Q5T686 147 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 STAC2Q6ZMT1 411 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 LINC00346Q8IVM7 164 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 SLAMF9Q96A28 289 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 SCPEP1Q9HB40 452 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 IL21Q9HBE4 155 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 ISYNA1Q9NPH2 558 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 APOBEC3BQ9UH17 382 aaKnown RBP11.37□□□□□ -0.59
UBE3B-204ENST00000449510 TRPM6Q9BX84 2022 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 GGT3PA6NGU5 568 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 SNAPINO95295 136 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 PMP2P02689 132 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 CPT2P23786 658 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 RORAP35398 523 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 NPY4RP50391 375 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 HACD4Q5VWC8 232 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 NRSN1Q8IZ57 195 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 OR1J2Q8NGS2 313 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF417Q8TAU3 575 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 PATE1Q8WXA2 126 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 NPAS1Q99742 590 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 PRR13Q9NZ81 148 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF629Q9UEG4 869 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-204ENST00000449510 ZNF175Q9Y473 711 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 ABLIM3O94929 683 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 CTGFP29279 349 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 GPR143P51810 404 aa11.37□□□□□ -0.59
UBE3B-204ENST00000449510 FLI1Q01543 452 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms