RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 IFNA14P01570 189 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 OR4A8P0C604 315 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 UMPSP11172 480 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 CD79AP11912 226 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 CSNK1A1P48729 337 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 GZMMP51124 257 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 BIDP55957 195 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 ZNF74Q16587 644 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 MST1LQ2TV78 715 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 HSP90B2PQ58FF3 399 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 PHYHD1Q5SRE7 291 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 REP15Q6BDI9 236 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 WDR88Q6ZMY6 472 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 MDP1Q86V88 176 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 OR4D11Q8NGI4 311 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 NANOS1Q8WY41 292 aaKnown RBP17.11■□□□□ 0.33
VCP-203ENST00000448530 VRK1Q99986 396 aaPredicted RBP17.11■□□□□ 0.33
VCP-203ENST00000448530 SLC19A3Q9BZV2 496 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 PCDHAC1Q9H158 963 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 SAR1AQ9NR31 198 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 FBXO9Q9UK97 447 aaPredicted RBP17.11■□□□□ 0.33
VCP-203ENST00000448530 SH3GLB1Q9Y371 365 aa17.11■□□□□ 0.33
VCP-203ENST00000448530 SONP18583 2426 aaKnown RBP17.1■□□□□ 0.33
VCP-203ENST00000448530 CHD3Q12873 2000 aaKnown RBP17.1■□□□□ 0.33
VCP-203ENST00000448530 RNF13O43567 381 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 CRLF1O75462 422 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 CELA3BP08861 270 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 IFNGR1P15260 489 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 CALCRP30988 508 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 ADIPOQQ15848 244 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 GSG1Q2KHT4 349 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 CARM1Q86X55 608 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 NUP37Q8NFH4 326 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 SEC61A2Q9H9S3 476 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 ZNF229Q9UJW7 825 aa17.1■□□□□ 0.33
VCP-203ENST00000448530 LOC100653049A0A140TA62 436 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 FXYD1O00168 92 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 KRT34O76011 436 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 LYPD3O95274 346 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 HLA-HP01893 362 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 THY1P04216 161 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 PDLIM4P50479 330 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 TAS2R41P59536 307 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 NHLRC1Q6VVB1 395 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 SLC35D2Q76EJ3 337 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 NANOGNBQ7Z5D8 188 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 CALHM3Q86XJ0 350 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 C10orf105Q8TEF2 133 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 TNFRSF13CQ96RJ3 184 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 FOXB1Q99853 325 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 ZNF442Q9H7R0 627 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 CAPN7Q9Y6W3 813 aa17.09■□□□□ 0.33
VCP-203ENST00000448530 IGHV2OR16-5A0A0B4J2B6 119 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 ZNF503-AS2A6NEH8 195 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 ENTPD5O75356 428 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 LY6HO94772 140 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 ERCC1P07992 297 aaPredicted RBP17.08■□□□□ 0.32
VCP-203ENST00000448530 B4GALT1P15291 398 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 NPR2P20594 1047 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 CRYBA2P53672 197 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 HGFACQ04756 655 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 PIGFQ07326 219 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 LOXL1Q08397 574 aaPredicted RBP17.08■□□□□ 0.32
VCP-203ENST00000448530 ZP4Q12836 540 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 EFNB3Q15768 340 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 DEF8Q6ZN54 512 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 MYPOPQ86VE0 399 aaPredicted RBP17.08■□□□□ 0.32
VCP-203ENST00000448530 PRIMA1Q86XR5 153 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 OR6X1Q8NH79 312 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 C10orf82Q8WW14 230 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 ZNF566Q969W8 418 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 SORCS2Q96PQ0 1159 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 POLR2J2Q9GZM3 115 aaKnown RBP17.08■□□□□ 0.32
VCP-203ENST00000448530 POLR2J3Q9H1A7 115 aaKnown RBP17.08■□□□□ 0.32
VCP-203ENST00000448530 SPEF1Q9Y4P9 236 aa17.08■□□□□ 0.32
VCP-203ENST00000448530 RAB36O95755 333 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 THBS4P35443 961 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 GUCY1A3Q02108 690 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 DAG1Q14118 895 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 CARTPTQ16568 116 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 TMEM249Q2WGJ8 235 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 CGB2Q6NT52 195 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 ZNF627Q7L945 461 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 TSPYL5Q86VY4 417 aaPredicted RBP17.07■□□□□ 0.32
VCP-203ENST00000448530 LRRC17Q8N6Y2 441 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 ZNF583Q96ND8 569 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 ZNF426Q9BUY5 554 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 RAB1BQ9H0U4 201 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 PLK3Q9H4B4 646 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 MYOZ1Q9NP98 299 aaPredicted RBP17.07■□□□□ 0.32
VCP-203ENST00000448530 ZNF446Q9NWS9 450 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 B3GNT2Q9NY97 397 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 TAS2R5Q9NYW4 299 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 GLTPQ9NZD2 209 aa17.07■□□□□ 0.32
VCP-203ENST00000448530 A8MV72 311 aaPredicted RBP17.06■□□□□ 0.32
VCP-203ENST00000448530 BLOC1S5-TXNDC5H3BN57 136 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 hCG_2039718K7EN88 272 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 NDUFS8O00217 210 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 GPRIN2O60269 458 aa17.06■□□□□ 0.32
VCP-203ENST00000448530 UBL3O95164 117 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms