RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 B3GLCTQ6Y288 498 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 FKBP9P1Q75LS8 142 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 NANOGNBQ7Z5D8 188 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 TSEN54Q7Z6J9 526 aaKnown RBP11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 RNF148Q8N7C7 305 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 OR6N1Q8NGY5 312 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 OR6X1Q8NH79 312 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 LIPHQ8WWY8 451 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 TMEM54Q969K7 222 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 FAM162AQ96A26 154 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 SGTBQ96EQ0 304 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 HSH2DQ96JZ2 352 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 ADAD1Q96M93 576 aaKnown RBP11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 Q96MF0 132 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 DHRS9Q9BPW9 319 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 TRAF4Q9BUZ4 470 aaPredicted RBP11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 B3GAT2Q9NPZ5 323 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 ADA2Q9NZK5 511 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 RHCGQ9UBD6 479 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 CRNNQ9UBG3 495 aaPredicted RBP11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 EGFL7Q9UHF1 273 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 MOKQ9UQ07 419 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 MED31Q9Y3C7 131 aa11.11□□□□□ -0.63
PRPF40A-203ENST00000448428 ZNF503-AS2A6NEH8 195 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 PIP5K1CO60331 668 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 DCTN3O75935 186 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 F13BP05160 661 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 TSPAN19P0C672 248 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 FOSL1P15407 271 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 CBR1P16152 277 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 PAX7P23759 505 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 IFNA8P32881 189 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 TTKP33981 857 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 CDKN1AP38936 164 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 AQP2P41181 271 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 RPL18Q07020 188 aaKnown RBP11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 MELKQ14680 651 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 LAPTM4AQ15012 233 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 AGAP6Q5VW22 663 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 LRFN4Q6PJG9 635 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 DTX2Q86UW9 622 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 FAM169BQ8N8A8 192 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 ANKS4BQ8N8V4 417 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 FAM156AQ8NDB6 213 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 RBM15BQ8NDT2 890 aaKnown RBP11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 GEMIN6Q8WXD5 167 aaKnown RBP11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 GTPBP3Q969Y2 492 aaKnown RBP11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 SLC38A2Q96QD8 506 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 FNDC11Q9BVV2 318 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 GRIP2Q9C0E4 1043 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 MAN2C1Q9NTJ4 1040 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 FAIMQ9NVQ4 179 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 TAGLN3Q9UI15 199 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 POFUT2Q9Y2G5 429 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 ATP23Q9Y6H3 246 aa11.1□□□□□ -0.63
PRPF40A-203ENST00000448428 ATP6V1G2-DDX39BF2Z307 99 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 PRSS23O95084 383 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 BCL10O95999 233 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 IGKV3-15P01624 115 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 IGLV1-44P01699 117 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 CELA3BP08861 270 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 CECR9P0C854 216 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 IFI30P13284 250 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 CSNK1A1P48729 337 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 FABP6P51161 128 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 TRAM2Q15035 370 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 C3orf36Q3SXR2 165 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 MEX3DQ86XN8 651 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 CCDC36Q8IYA8 594 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 OFCC1Q8IZS5 231 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 PGAM4Q8N0Y7 254 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 FBXL14Q8N1E6 418 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 CIARTQ8N365 385 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 MOSPD2Q8NHP6 518 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 ZNF566Q969W8 418 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 BPIFA2Q96DR5 249 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 TRMT61AQ96FX7 289 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 SLC25A44Q96H78 314 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 CDRT15Q96T59 188 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 ULBP2Q9BZM5 246 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 GSX1Q9H4S2 264 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 SEC61A2Q9H9S3 476 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 CBLN4Q9NTU7 201 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 DCAF13Q9NV06 445 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 B3GNT2Q9NY97 397 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 GLTPQ9NZD2 209 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 RPS6KA6Q9UK32 745 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 ENPP4Q9Y6X5 453 aa11.09□□□□□ -0.63
PRPF40A-203ENST00000448428 PLCE1Q9P212 2302 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 MAP1AP78559 2803 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 TRIM64A6NGJ6 449 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 TRIM64BA6NI03 449 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 NDUFS7O75251 213 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 PGA4P0DJD7 388 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 PGA3P0DJD8 388 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 HSD17B1P14061 328 aa11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 TCN1P20061 433 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-203ENST00000448428 MAKP20794 623 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms