RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 RAC2P15153 192 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 ZNF250P15622 560 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 SPNP16150 400 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 HOXD9P28356 352 aaPredicted RBP8.55□□□□□ -1.04
SMC6-207ENST00000448223 TIA1P31483 386 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMC6-207ENST00000448223 THBS2P35442 1172 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 OR10A3P58181 314 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 NFATC2Q13469 925 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 ACOT6Q3I5F7 207 aaPredicted RBP8.55□□□□□ -1.04
SMC6-207ENST00000448223 COL5A1-AS1Q5SY13 56 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 TMEM19Q96HH6 336 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 FUBP3Q96I24 572 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMC6-207ENST00000448223 MCOLN1Q9GZU1 580 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 UCK1Q9HA47 277 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 SLC6A13Q9NSD5 602 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 DPP7Q9UHL4 492 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 SLCO3A1Q9UIG8 710 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 ZNF354AO60765 605 aaPredicted RBP8.55□□□□□ -1.04
SMC6-207ENST00000448223 KLKB1P03952 638 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 ADH5P11766 374 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 ACHEP22303 614 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 BDKRB1P46663 353 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 RPS18P62269 152 aaKnown RBP8.55□□□□□ -1.04
SMC6-207ENST00000448223 PMS2P11Q13670 270 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 ZNF528Q3MIS6 628 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 HENMT1Q5T8I9 393 aaKnown RBP8.55□□□□□ -1.04
SMC6-207ENST00000448223 Q6ZVL8 140 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 CYB561A3Q8NBI2 242 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 OR4K15Q8NH41 348 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 PNPLA2Q96AD5 504 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 SLC25A46Q96AG3 418 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 TRMT2BQ96GJ1 504 aaKnown RBP8.55□□□□□ -1.04
SMC6-207ENST00000448223 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 NPAS1Q99742 590 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 NXF2Q9GZY0 626 aaKnown RBP8.55□□□□□ -1.04
SMC6-207ENST00000448223 UBQLN4Q9NRR5 601 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 AK3Q9UIJ7 227 aa8.55□□□□□ -1.04
SMC6-207ENST00000448223 LAMP1P11279 417 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 PSMB10P40306 273 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 RFC3P40938 356 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 ZNF140P52738 457 aaPredicted RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 GP2P55259 537 aaKnown RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 MLF1P58340 268 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 TAS2R46P59540 309 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 ADARB1P78563 741 aaKnown RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 HNF4GQ14541 408 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 C3orf38Q5JPI3 329 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 LEG1Q6P5S2 330 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 DHRS11Q6UWP2 260 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 VITQ6UXI7 678 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 TRAPPC6BQ86SZ2 158 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 WBP2Q969T9 261 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 CNIH4Q9P003 139 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 CLCF1Q9UBD9 225 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 EXOGQ9Y2C4 368 aaKnown RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 CSAG2Q9Y5P2 127 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 TCRBV5S2A0A599 114 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 OR5H14A6NHG9 310 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 SOCS6O14544 535 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 STC2O76061 302 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 STAG3L2P0CL84 134 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 SHC1P29353 583 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 PIN1Q13526 163 aaPredicted RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 RGNQ15493 299 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 DECR1Q16698 335 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 MAJINQ3KP22 176 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 SFRP5Q5T4F7 317 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 CPZQ66K79 652 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 TMEM182Q6ZP80 229 aaPredicted RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 MAML2Q8IZL2 1156 aaPredicted RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 SLC39A11Q8N1S5 342 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 FBXL6Q8N531 539 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 PSMF1Q92530 271 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 NOL4LQ96MY1 436 aaPredicted RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 SLC22A12Q96S37 553 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 MACROD1Q9BQ69 325 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 RAB11FIP5Q9BXF6 653 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 AQP7P3A6NL99 342 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 ENSAO43768 121 aaKnown RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 GPRIN2O60269 458 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 FAM163BP0C2L3 166 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 CHRNB4P30926 498 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 AQP6Q13520 282 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 GBX1Q14549 363 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 RSPO2Q6UXX9 243 aaPredicted RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 HSD17B13Q7Z5P4 300 aaPredicted RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 KIAA1958Q8N8K9 716 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 CYB5D2Q8WUJ1 264 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 TMEM37Q8WXS4 190 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 TSSK2Q96PF2 358 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 RAB18Q9NP72 206 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 ADAM29Q9UKF5 820 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 ZNF638Q14966 1978 aaKnown RBP8.54□□□□□ -1.04
SMC6-207ENST00000448223 TRDV1A0A1B0GX56 115 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 A0A1W2PRU2 124 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 XKRY2A2RUG3 117 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 FAM166BA8MTA8 275 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 HIDE1A8MVS5 230 aa8.54□□□□□ -1.04
SMC6-207ENST00000448223 SLC16A7O60669 478 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms