RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PRPS1P60891 318 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 LAPTM4AQ15012 233 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 KLHL24Q6TFL4 600 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 CYP2R1Q6VVX0 501 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 ZNF730Q6ZMV8 503 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 CYP4Z1Q86W10 505 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-204ENST00000446876 ACOT11Q8WXI4 607 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-204ENST00000446876 PYURFQ96I23 114 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 CCL19Q99731 98 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 FOXC2Q99958 501 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 ULBP2Q9BZM5 246 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 NMNAT1Q9HAN9 279 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-204ENST00000446876 EDARQ9UNE0 448 aa12.97□□□□□ -0.33
HDAC4-204ENST00000446876 TRAV27A0A087WT01 109 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 ZNF503-AS2A6NEH8 195 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 UBOX5O94941 541 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 H1F0P07305 194 aaKnown RBP12.96□□□□□ -0.33
HDAC4-204ENST00000446876 SAGP10523 405 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-204ENST00000446876 CD40P25942 277 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 CDH11P55287 796 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 SH3BGRP55822 239 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-204ENST00000446876 PRKCDQ05655 676 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 RUNX1T1Q06455 604 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 ZNF672Q499Z4 452 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-204ENST00000446876 IQCCQ4KMZ1 466 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 FGD3Q5JSP0 725 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 ANKRD16Q6P6B7 361 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 PODNL1Q6PEZ8 512 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 KLHL17Q6TDP4 642 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 C20orf204Q6ZNR8 217 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 TRPM8Q7Z2W7 1104 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 IGFN1Q86VF2 1251 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 OR13C2Q8NGS9 318 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 OR6X1Q8NH79 312 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 SLC7A13Q8TCU3 470 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 LIPHQ8WWY8 451 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 TMEM54Q969K7 222 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 MBD6Q96DN6 1003 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 CLPTM1LQ96KA5 538 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 INIPQ9NRY2 104 aa12.96□□□□□ -0.33
HDAC4-204ENST00000446876 FAM32AQ9Y421 112 aaKnown RBP12.96□□□□□ -0.33
HDAC4-204ENST00000446876 TRBV4-1A0A0J9YWV2 114 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 A0A1W2PRG6 482 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF99A8MXY4 864 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-204ENST00000446876 EFCAB9A8MZ26 197 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 MCIDASD6RGH6 385 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 CDC42EP2O14613 210 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 BCL10O95999 233 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 WNT11O96014 354 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 TSPAN19P0C672 248 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 RHCEP18577 417 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 UBE2NP61088 152 aaKnown RBP12.95□□□□□ -0.34
HDAC4-204ENST00000446876 TOP3AQ13472 1001 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-204ENST00000446876 FHL1Q13642 323 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 SEC23BQ15437 767 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 TMEM108Q6UXF1 575 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 B3GLCTQ6Y288 498 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 MBOAT2Q6ZWT7 520 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 SSX8Q7RTT4 187 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF611Q8N823 705 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 OR52J3Q8NH60 311 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 OR51A7Q8NH64 312 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 ASB10Q8WXI3 467 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 HTRA1Q92743 480 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 ZNF566Q969W8 418 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 BOD1Q96IK1 185 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 FAM46AQ96IP4 442 aaKnown RBP12.95□□□□□ -0.34
HDAC4-204ENST00000446876 LRR1Q96L50 414 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 ADAD1Q96M93 576 aaKnown RBP12.95□□□□□ -0.34
HDAC4-204ENST00000446876 ALPK1Q96QP1 1244 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 PIP5K1AQ99755 562 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 CXXC4Q9H2H0 198 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 SEC61A2Q9H9S3 476 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 B3GAT2Q9NPZ5 323 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 TAS2R1Q9NYW7 299 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 HIF3AQ9Y2N7 669 aa12.95□□□□□ -0.34
HDAC4-204ENST00000446876 ARPC4-TTLL3A0A0A6YYG9 625 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 IGHV1-18A0A0C4DH31 117 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 A0A1W2PRQ8 180 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 CELA3BP08861 270 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 PGA4P0DJD7 388 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 PGA3P0DJD8 388 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 B4GALT1P15291 398 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 PTAFRP25105 342 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 CAPZA2P47755 286 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 RPS4XP62701 263 aaKnown RBP12.94□□□□□ -0.34
HDAC4-204ENST00000446876 MYBPC1Q00872 1141 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 MS4A2Q01362 244 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 SPIBQ01892 262 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 DGCR6Q14129 220 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 SPATS1Q496A3 300 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 ALG10Q5BKT4 473 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 SLC22A25Q6T423 547 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 MYPOPQ86VE0 399 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-204ENST00000446876 LRRC75AQ8NAA5 344 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 SYT14Q8NB59 555 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 NOXO1Q8NFA2 376 aa12.94□□□□□ -0.34
HDAC4-204ENST00000446876 MAGEE2Q8TD90 523 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-204ENST00000446876 IGFBPL1Q8WX77 278 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms